Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02523 ATGAGCGTTCCACCGCCGCCGCTGATGTGGCCACCCTCTCATCCACCGTTCACCGTATCCCAGTGGCAGGAGCTAGAACACCAAGCTCTCATCTTCAAGTATCTCAAAGCTGGTGTGTCGGTTCCTCCCGACCTCCTTTTACCTATTCGGAAAAGTCTTCAATTGATGTCTCACCCATCTCTGGGGTATTATGGGAAGAAAATTGACCCGGAACCAGGTAGGTGTAGAAGAACCGATGGAAAAAAATGGAGATGCTCTAGGGATGCTCATCCTGATTCTAAGTACTGTGACCGTCACATGATACGACGTCGTTACCGTTCAAGAAAGCCTGTGGAATCTTCTTCTTCTTCTTCTCAATCTCAATCTTCATCTTCACTTTCTTCTACTTCACAACAACTTGCTCCTTCTATTGGAGTTGCTACTACTGCTACTACTACTGTTTCTGCCACTGATACTTCAACTTTCCATACACTTCCTTTGCATACTAATGGTACTCGTGAAAGTTTGGGTTTCACTCTTGGGAACACCATGCCCCACATGGACCCTATGCTTCTTCCTCTTCAGGGTTCTAAGAAACCTTATAGGTTTGGACTGAACTCGGAAGCAGAGGAGCACAACCTCTTACAGAAAGATCTCGGAACTGTCAAGTATCAAGGCTACGACTTTACATCAGATGGCATGTGGTATAACAACATGTCTCAGATACCATCCAACACAGTATCCGAGTCAAGGAGCAATTCCAGCATGGTTAACAACAGTAACTACTTCCAACAGCAGCGAACAACACGAGAGCCCGAGCTGATGTTTAGCCTCGACGCTGCAAGGTCCAAGGAAATCGTCTTTAATGGCCAGTTAGGTAGTATGAAACAGGACTATCAATCATCTCCTCAGTCTCTCTTCAACGACTGGCAGTGGAAGAAAGATTTAGCCTCGTCTACCATGGAGTATAGACCAAGCAAGGATTTTAACACCAACCCGGATATCAATGCCGATTAA 996 0.4578 MSVPPPPLMWPPSHPPFTVSQWQELEHQALIFKYLKAGVSVPPDLLLPIRKSLQLMSHPSLGYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVESSSSSSQSQSSSSLSSTSQQLAPSIGVATTATTTVSATDTSTFHTLPLHTNGTRESLGFTLGNTMPHMDPMLLPLQGSKKPYRFGLNSEAEEHNLLQKDLGTVKYQGYDFTSDGMWYNNMSQIPSNTVSESRSNSSMVNNSNYFQQQRTTREPELMFSLDAARSKEIVFNGQLGSMKQDYQSSPQSLFNDWQWKKDLASSTMEYRPSKDFNTNPDINAD 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02523 331 MobiDBLite consensus disorder prediction 111 132 - -
Vivi2g02523 331 MobiDBLite consensus disorder prediction 69 132 - -
Vivi2g02523 331 ProSiteProfiles WRC domain profile. 69 113 IPR014977 -
Vivi2g02523 331 PANTHER GROWTH-REGULATING FACTOR 5 16 311 IPR031137 GO:0005634|GO:0006351|GO:0032502
Vivi2g02523 331 SMART QLQ_2 15 51 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vivi2g02523 331 MobiDBLite consensus disorder prediction 69 99 - -
Vivi2g02523 331 Pfam WRC 70 112 IPR014977 -
Vivi2g02523 331 Pfam QLQ 16 50 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vivi2g02523 331 ProSiteProfiles QLQ domain profile. 16 51 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02523 Vivi-Chr2 115685468 115688033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02523 15 112 GRF Transcription Factor Family AT3G13960 60.000 1.28e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Vivi2g02523 WRC 2.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02523 - - gmx:100809947 404.445