Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02502 ATGGCCAGCAGTAGCACTCAAAGTAGCAGCAACACGTCTTCTTCTATAGTGAAATTTCCATGGAGAAATTCCTATGACGTGTTTGTGAGCTTTAGAGGTAAAGATACTCGACTTAATTTCACTAATCATCTTTTTGCAGCCCTCCAAAGAAAAGGTATTTATGCATTTAAGGATGACACTAAGCTCAACAAAGGTGAATCCATAGCACCCGAGCTCTTTCGAGCAATCCAAGACTCTCAGATTTTCATTGTGGTTTTCTCTAAGAACTATGCTTCCTCAACTTGGTGCTTGAGAGAATTACAACACATTCTTCTTCACTGCGGTCAACACTCGGAAAAACGCATTTTGCCTGTTTTCTATGACGTTGATCCTTCTGAGGTAAGACATCAAAAAGAAACTTACGGGGAAGCCTTAGCTAAACATGCAGAAAGATTCAAACAAGACTCCGAGAAGGTGCAAAAATGGAGGACAGCTCTCTCACAAGTCGCAGATCTCTCTGGCTGGGATGTACGTCATAAGCCACAACATGCAGAGATTGAAGACATTGTTGATCAAATTATAAATAAATTAGTTTCCAAATTTTCAAGTCTTCCAAAAGATTTAGTAGGGATTCACCCTCCTATGTGGGAATTAGAAAAGAATTTAGTTTTGGACTCGCTTGATGATGTCCGTGTTGTAGGAATTTATGGCATGGGAGGAATAGGGAAGACAACTCTTGCTAAAGCTGTGCACAACAAAATCTCTCATCAATTTGATGTGTGTTGCTTTATTGACGATTTAAGCAAAAGTTATAAGCAAGATGGTCTTATCAGTGCACAAAAGGAAACTCTACTTCAAATTGCAGGTGAAGAACAACTTCAAACATGCAATTCTTACAACACACCTTACTTGATACGACGTAGACTGCATCGTGTAAGGGCCCTTATAACTATTGACAATGTTGATCAAGTTAAGCAACTCGAGGAATTAGGCGTGGATCGTGAATGCTTAGGTCCAGGGAGTAGAATAATAATAACTTCTAGAGATAAGCATATATTTGAAGAGTATGGAGTGGATGCTGTTTACCCAGTTCCACACTTGAATAGAAAAAATTCTCTTCAATTACTAAGTCGAAGAGCTTTTAAACTTGATCATATTGTGAGTAGTTATGATAAGTTAGCACAGGAGATAGTATATTATGCAGGTGGCTTGCCACTGGCAATTAAAGTATTGGGTTCATTTTTGTGTGGTCGTAATATCTCTGAATGGAAAAGTGCATTGGCAAGATTGAGAGAAAGTCCAAACAAAGATATCATGGATGTGTTGCGATTAAGTTTTGATGGGCTGGAGGAACCAGAACAGGAAATATTTCTTCATATTGCTTGTTTTTTCCACTATGGAAGTGAGAAATATGTTACAAATGTTCTTAAATGTTGTGGACTTAAAGCTGATATTGGATTGAAACTTCTAATAGAGAAATCACTTATAATCCTTTCGGAAGAAAGTAGAATTCAAATGCATGCTTCGTTAGAAGATTTGGGCATAAAAATTGCTCAAGAAGAACCAAGAAAGTGGAGCAGGGTGTGGCTCGAGGAACAGTTTGACTATGTTAAGTTGGAGAAAATGGAAGAGAAGGTTAAAGCCATTTGCAATGAAAGAGGAAAAGATTTAATGATCAAGGCAGAAACATTGTCAAAAATGAGTCATTTAAGATTGCTCATACTGATTGGAGTTGATTTATTAGGAAACCTCAGTTGCCTTTCTAACGAGTTAAGATACATGGAGTGGGTTGGATATCCTTGCAAGTATTTGCCATCAAGTTTTCAACCCAGTCAACTTGTTGAATTGATCTTGAGTTGCAACAACATAAAACAACTATGGAAAGACAAGAAGTGTCTCCCACATTTGAGAAAATTGGATTTGAGCCACTCAATAAATCTAAGAAAGATGCCAGATTTTGAAGATATCCCAAATCTTGAGAAACTAAGTTTTGAAGGATGTGTAAAGTTGGTGCATATGGATCCATCTATTGGAGTTCTAAGAAAGCTTGTTTTCTTGACTTTGGAAGATTGCATAAATTTAGTAAGCATACCAGACAGCATATTTGGTCTCAGCTCTCTTAAATATGTAAATCTTTCCGGGTGTCGCAAATTATTTAAGAATCCAAGGATTTCGAATATAAGAGGAAACACATCACAGTCCCAATCAACAATGTTCTCTATCTTGAAATGGACAGTTTTTCATCATTCGTTATGCTCCCGCGCACCCAAAGATTTACGAGGTTATTTGTTGCCTTTCTTGGTTAACTTCTCTAACTTGCGTGATCTTGATATTAGTTTTTGTGGCCTAAGCCAACTCCCTGATGCAATTGGATGCTTACGTTGGCTTGAAGAATTAAATTTAGGGGGAAACAAATTTGTAAGGTTGCCTAGTCTGAAGGAGCTTCATAGACTTGTATTTTTAAACTTGGAGCACTGCAAGCTCTTGGAATCCTTGCCTGAACTTCCTTTTCGTGTTGCTATCGCTCGGGAGCATCGAGAGGACATACAGATAGTCAAAAAAGGATTGGTCATTTTCAATTGTCCTAACTTGAGTGAGAAGGAACTTGGCAGTACTATTAGTTATTCATGGATGCCACAGTTTATTCAGGCAAACGAAGTATTCACTAATGAAATTTATTTTGTAGTTCCAGGGAGTGAAATACCAAGTTGGTGCAACAATCAGAGTGAGGGTAATTTAATAAGATTAGATCTATCTCCTATTATGTCTGGCAATTACAGTAATATCAGTGGCATTGCGTGTTGTACAATATTTTCTGCTGCACCTCTTGACCCGACAAGATCCGCACGAAGAACTGGAATAGAAATAGGTATTTGTAATAGTAAGATTAACATTTGGCATGGTAAGAGGCTCATCCCAGTAATTCTTGAAGGAGATCTTATTGAGATAAATTCAGATCACTTGTGCCTGATATATTTCCCTCTGAAATCATTCATTTATTTCCTGAAGTGCTTAGACGAAACTTTCAGCGATCTTGATCATTTTAAGCTGTATGTTAGTATTTGTAACTGTGCATATATTGGTTTTGGTGAAGTTTCGGATTTGAAGGTTAAGAAGTGTGGGTATCATTGGGTATACAAACAAGATCATGCATCGCAGCTGAAACTCCTTAGCTCAGAAGTGCAAGTTTTGGCAATTGAAAACGATTATTGA 3192 0.3756 MASSSTQSSSNTSSSIVKFPWRNSYDVFVSFRGKDTRLNFTNHLFAALQRKGIYAFKDDTKLNKGESIAPELFRAIQDSQIFIVVFSKNYASSTWCLRELQHILLHCGQHSEKRILPVFYDVDPSEVRHQKETYGEALAKHAERFKQDSEKVQKWRTALSQVADLSGWDVRHKPQHAEIEDIVDQIINKLVSKFSSLPKDLVGIHPPMWELEKNLVLDSLDDVRVVGIYGMGGIGKTTLAKAVHNKISHQFDVCCFIDDLSKSYKQDGLISAQKETLLQIAGEEQLQTCNSYNTPYLIRRRLHRVRALITIDNVDQVKQLEELGVDRECLGPGSRIIITSRDKHIFEEYGVDAVYPVPHLNRKNSLQLLSRRAFKLDHIVSSYDKLAQEIVYYAGGLPLAIKVLGSFLCGRNISEWKSALARLRESPNKDIMDVLRLSFDGLEEPEQEIFLHIACFFHYGSEKYVTNVLKCCGLKADIGLKLLIEKSLIILSEESRIQMHASLEDLGIKIAQEEPRKWSRVWLEEQFDYVKLEKMEEKVKAICNERGKDLMIKAETLSKMSHLRLLILIGVDLLGNLSCLSNELRYMEWVGYPCKYLPSSFQPSQLVELILSCNNIKQLWKDKKCLPHLRKLDLSHSINLRKMPDFEDIPNLEKLSFEGCVKLVHMDPSIGVLRKLVFLTLEDCINLVSIPDSIFGLSSLKYVNLSGCRKLFKNPRISNIRGNTSQSQSTMFSILKWTVFHHSLCSRAPKDLRGYLLPFLVNFSNLRDLDISFCGLSQLPDAIGCLRWLEELNLGGNKFVRLPSLKELHRLVFLNLEHCKLLESLPELPFRVAIAREHREDIQIVKKGLVIFNCPNLSEKELGSTISYSWMPQFIQANEVFTNEIYFVVPGSEIPSWCNNQSEGNLIRLDLSPIMSGNYSNISGIACCTIFSAAPLDPTRSARRTGIEIGICNSKINIWHGKRLIPVILEGDLIEINSDHLCLIYFPLKSFIYFLKCLDETFSDLDHFKLYVSICNCAYIGFGEVSDLKVKKCGYHWVYKQDHASQLKLLSSEVQVLAIENDY 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02502 1063 Pfam NB-ARC domain 219 429 IPR002182 GO:0043531
Vivi2g02502 1063 Gene3D - 359 443 IPR042197 -
Vivi2g02502 1063 Gene3D Ribonuclease Inhibitor 545 732 IPR032675 -
Vivi2g02502 1063 Gene3D Ribonuclease Inhibitor 740 929 IPR032675 -
Vivi2g02502 1063 SUPERFAMILY "Winged helix" DNA-binding domain 430 520 IPR036390 -
Vivi2g02502 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 453 IPR027417 -
Vivi2g02502 1063 Gene3D - 23 188 IPR035897 -
Vivi2g02502 1063 SMART till_3 24 165 IPR000157 GO:0007165
Vivi2g02502 1063 FunFam Disease resistance protein (TIR-NBS-LRR class) 21 192 - -
Vivi2g02502 1063 Pfam TIR domain 25 197 IPR000157 GO:0007165
Vivi2g02502 1063 ProSiteProfiles Leucine-rich repeat profile. 788 809 IPR001611 GO:0005515
Vivi2g02502 1063 PRINTS Disease resistance protein signature 225 240 - -
Vivi2g02502 1063 PRINTS Disease resistance protein signature 301 315 - -
Vivi2g02502 1063 PRINTS Disease resistance protein signature 394 408 - -
Vivi2g02502 1063 PRINTS Disease resistance protein signature 695 711 - -
Vivi2g02502 1063 Pfam C-JID domain 889 1042 IPR045344 -
Vivi2g02502 1063 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 168 IPR035897 -
Vivi2g02502 1063 ProSiteProfiles TIR domain profile. 23 190 IPR000157 GO:0007165
Vivi2g02502 1063 SUPERFAMILY L domain-like 552 865 - -
Vivi2g02502 1063 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 717 IPR044974 GO:0006952
Vivi2g02502 1063 Gene3D - 189 353 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02502 Vivi-Chr2 114924052 114928181 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02502 18 834 WRKY Transcription Factor Family AT4G12020 29.918 3.97e-81 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02502 - - tpra:123883787 1040.8