Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02500 ATGGTGACAGCTTTGCAGGCAGAGACATTAATTAATGTTACAGTTGTCATGTTGCGACGTGGTTCTCACGTGGCAAATAGCGATGTGATTCTCACGTCGCTACATTGTGTATTTATCTACGCAATTCACTTCACTCCACCACCATTCATTAGAACAACAACAGAATTCTTTTTCGTTTCCTCTCCAAAACCAGAACCACAACCCTTCTCTCCTAAAACCAGAAATCCAACCCTTCTCTCCCAAAATCCAATTGCAATACCAATTCAATCCCAAATATTTTTCTTATATCAAAGCAGCAACCCCCCTTCTTCTCTAGTGAAATCTCCATGGAGAAATTCCTATGACGTGTTTGTGAGCTTTAGAGGTAAAGATACTCGACTTAGTTTCACTGATCATCTTTTTGCAGCTCTCCAAAGAAAAGGTATTTATGCATTTAGGGATGACACTAAGCTCAACAAAGGTGAATCCATAGCACCCGAGCTCCTTCGAGCAATCCAAGACTCTCAGATTTTCGTTGTGGTTTTGTCTAAGAACTATGCTTCCTCAACTTGGTGCCTCAGAGAATTACAACACATTCTTCTTCACTGCAGTCAACAATCTGAAAAACGCGTTTTTCCAGTATTCTATGACGTTGATCCTTCTGAGGCGAGACATCAAAAAGAAACTTATGGGGAAGCCTTAGCTAAGCATGCAGAAAGATTCAAACAAGACTCCGAGAAGGTGCAAAAATGGAGGACAGCTCTCTCACAAGTCGCAGATCTCTCTGGCTGGGATGTACGTCATAAGTCACAACATGCAGAGATTGAAGACATTGTTGATCACATTATAAATAAATTAGTTTCCAAATTTTCAAGTCTTCCAAAAGATTTAGTAGGGATTCACCCTCCTATGTGGGAATTAGAAAAGAATTTAGTTTTGGACTCGCTTGATGATGTCCGTGTTGTAGGAATTTATGGCATGGGAGGAATAGGGAAGACAACTCTTGCTAAAGCTGTGCACAACAAAATCTCTCATCAATTTGATGTGCATTGCTTTATTAAAGATTTAAGCAGAAGTTATAAGCAAGATCGTCTGATCAGTGCACAAAAGGAAACTCTACTTCAAATTGCAGGTGAAGAACAACTTCAAACATGCAATTCTTACAACACATCTTACTGGATACAACGCAGACTACATCGTGTAAAGGCCCTTATAACTATTGACAACGTTGATCATGCACAATATACATTAACCAAACAACAACGAGTAGCTGTATGTGAATGGGTTAAAAACCTTAAGCTTCCAGATGGTTATGTTTCTAATTTAAGTAGATGTGTTGACTTGAAGGAAGCAAAGTTGTTTGGCATGAAGAGTCATGACTGCCATGTATTCATGCAACGTTTGCTACCATTAGCCTTCAAAGCCTTACCCAAACCGATTTTGAATACACTGACTGAATTCAGCCAATTCTTTAGAGAAATTACGTCATCTTTGTTGAGAGAGGATAAATTGCGTAGTTTGGAGGAAAACATTCCAATCATAATGTGCAAATTAGAACAAATATTTCCTCCAAGCTTTTTTGACTCAATGGAACATCTTCCTATTCATTTAGCTTATGAAGCAAGAGTTGGCGGTCCTGTGCAATATAGATGGATGTATCCATTTGAAAGGTTCATCCGAACTTTAAAACAAAAGGTAACGAATCAGGCTCGTGTTGAAGGTTCGATTTGTAAAGCATATTTATTAGAGGAGATGTCCACATTTGCTTCCTATTACTATCCACCCGATGTTCCATCAAGGAGAACAAGAGTGCCACGAAATGATGATGGGGGAGAGGATTTTTCAATGGGTCCTCCATTGTCAATCTTTAATTACCCGGGCCGTCCATTTGGAAAAAGTACCACTTCTACCTTGGATGATAAGGAAATGAAAGCTGCTCACTTGTATATTCTTTTAAATTGTCCTGAAGTGGTACCTTACCTGGATATGCACTCTGATTTGTTACGAGAGTTAGATCCTCAGTTGAATGAAACTGATTTGGATAAGCAAGTTTCCGCATCATTCCCAACATGGTTCAAAACATATGTGCTTGATTCAAGGAACATGATAGACGATGTGCTTTTAAGGAGTTTGGCATGGGGCCCTATTAGAGAAGTTGTTAAATGGTCTGGTTATGTTATTAATGGCTACAAGTTTGTGACCAAATCTCGAAATGAAGGGATGAGTACAACCAATCACAATGTTTGTGTTCGGGGAGGGCAATTTGATTCATTAGAAAATGATTACTATGGAGTTTTGAATGACATTGTCGAACTAGAGTACACTGGTCACCCGACAAAGAAGGTGGTTTTATTTCAATGTGATTGGTTTGATCCTAGTTCTCAAGGGACAAAGATGGATAACTATGGAAATGTTGAGATTAAAAAATCTAGGAGATATCAAAATTATGATCCTTTTGTATTATCCCAACAAGCTGACCAAGTTTACTTTACATCATTTCCTGAAGGGCAACAAGGTTGGCTAGGAGTCATAAAAACCAAGGCACGGAGTACCATTCAATCTATGGAAAAAAACAAACATGAAACAACTGATGCATATCAAGATGATGATGTTCATCAAATACCTATAGTTGTTTCAAATGATGATGATGATTTTCATCAAATAAATTAA 2649 0.3832 MVTALQAETLINVTVVMLRRGSHVANSDVILTSLHCVFIYAIHFTPPPFIRTTTEFFFVSSPKPEPQPFSPKTRNPTLLSQNPIAIPIQSQIFFLYQSSNPPSSLVKSPWRNSYDVFVSFRGKDTRLSFTDHLFAALQRKGIYAFRDDTKLNKGESIAPELLRAIQDSQIFVVVLSKNYASSTWCLRELQHILLHCSQQSEKRVFPVFYDVDPSEARHQKETYGEALAKHAERFKQDSEKVQKWRTALSQVADLSGWDVRHKSQHAEIEDIVDHIINKLVSKFSSLPKDLVGIHPPMWELEKNLVLDSLDDVRVVGIYGMGGIGKTTLAKAVHNKISHQFDVHCFIKDLSRSYKQDRLISAQKETLLQIAGEEQLQTCNSYNTSYWIQRRLHRVKALITIDNVDHAQYTLTKQQRVAVCEWVKNLKLPDGYVSNLSRCVDLKEAKLFGMKSHDCHVFMQRLLPLAFKALPKPILNTLTEFSQFFREITSSLLREDKLRSLEENIPIIMCKLEQIFPPSFFDSMEHLPIHLAYEARVGGPVQYRWMYPFERFIRTLKQKVTNQARVEGSICKAYLLEEMSTFASYYYPPDVPSRRTRVPRNDDGGEDFSMGPPLSIFNYPGRPFGKSTTSTLDDKEMKAAHLYILLNCPEVVPYLDMHSDLLRELDPQLNETDLDKQVSASFPTWFKTYVLDSRNMIDDVLLRSLAWGPIREVVKWSGYVINGYKFVTKSRNEGMSTTNHNVCVRGGQFDSLENDYYGVLNDIVELEYTGHPTKKVVLFQCDWFDPSSQGTKMDNYGNVEIKKSRRYQNYDPFVLSQQADQVYFTSFPEGQQGWLGVIKTKARSTIQSMEKNKHETTDAYQDDDVHQIPIVVSNDDDDFHQIN 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02500 882 FunFam Disease resistance protein (TIR-NBS-LRR class) 110 281 - -
Vivi2g02500 882 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 280 407 IPR027417 -
Vivi2g02500 882 Gene3D - 107 278 IPR035897 -
Vivi2g02500 882 Pfam NB-ARC domain 308 403 IPR002182 GO:0043531
Vivi2g02500 882 Pfam Domain of unknown function (DUF4216) 764 833 IPR025312 -
Vivi2g02500 882 PRINTS Disease resistance protein signature 459 473 - -
Vivi2g02500 882 PRINTS Disease resistance protein signature 390 404 - -
Vivi2g02500 882 PRINTS Disease resistance protein signature 314 329 - -
Vivi2g02500 882 PANTHER DUF4218 DOMAIN-CONTAINING PROTEIN-RELATED 385 863 - -
Vivi2g02500 882 Pfam Domain of unknown function (DUF4218) 487 600 IPR025452 -
Vivi2g02500 882 SUPERFAMILY Toll/Interleukin receptor TIR domain 109 257 IPR035897 -
Vivi2g02500 882 Gene3D - 279 434 IPR027417 -
Vivi2g02500 882 SMART till_3 113 254 IPR000157 GO:0007165
Vivi2g02500 882 ProSiteProfiles TIR domain profile. 112 279 IPR000157 GO:0007165
Vivi2g02500 882 Pfam TIR domain 114 286 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02500 Vivi-Chr2 114902781 114914287 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02500 114 404 WRKY Transcription Factor Family AT4G12020 28.231 6.95e-21 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02500 - - vvo:131649832 1788.08