Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02490 ATGATGGAGAGTGGTGAGAGAGGAGGAGAAGGTTATGATGGAGTGATGATGACGATGACACGAGACCCGAAGCCGAGGCTGAGGTGGACAGCTGATCTTCACGACCGGTTTGTCGATGCTGTCACAAAGCTTGGTGGTCCTGATAAGGCAACTCCAAAGGCTGTTCTAAGGTTAATGGGCTTAAAAGGATTGACATTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAAAATGGTCGGAAACAATATGAAGAACAATACAAAGAGAATAACAGGTGTTCCTATGTAAATTTCAGTAACCATTCTTCACAGACTAATGCCAGTTATGGAGGTGATAACGAAGAGGGGGAAATCCCAATAGCTGAGGCACTTAAGCAACAAATTGAAGTTCAAAAGGGATTAGAAGAGCAATTTGAGGTAAACAAGAAATTGCAAATGAGAATAGAGGCACAAGAGAAGTATTTTCAGGCAGTGTTAGAGAAAGCACAAACAAGTCTTTCACAAGTTGGACAAAGCAATCTTGAATTCAACTCAGCTTTATCAAATTTCATGGAAAATATGAACAAAGATAGTAAAGAAAACATAATAGACATGAATGAGTTTTATAATAAGAATCATACTTCAGTTTTCAATTATCAAGAAGTACTAGGAACAGAAGAAAATAAAGAACTAAAGCCTCAAGTTGTAGGGGATTCAATTCAGCTAGACTTAAACATCAAAGGTGGCAATGAACTTTTATGTGTAGATGGAGCTGAAATGGAATCCAAGATGGTTTCATATAGGGTATTCCAATTTTGA 807 0.3767 MMESGERGGEGYDGVMMTMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKAVLRLMGLKGLTLYHLKSHLQKYRLGQNGRKQYEEQYKENNRCSYVNFSNHSSQTNASYGGDNEEGEIPIAEALKQQIEVQKGLEEQFEVNKKLQMRIEAQEKYFQAVLEKAQTSLSQVGQSNLEFNSALSNFMENMNKDSKENIIDMNEFYNKNHTSVFNYQEVLGTEENKELKPQVVGDSIQLDLNIKGGNELLCVDGAEMESKMVSYRVFQF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02490 268 Gene3D - 23 81 - -
Vivi2g02490 268 Pfam Myb-like DNA-binding domain 27 77 IPR001005 -
Vivi2g02490 268 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 194 IPR044848 GO:0003700
Vivi2g02490 268 Pfam MYB-CC type transfactor, LHEQLE motif 122 167 IPR025756 -
Vivi2g02490 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 81 IPR017930 -
Vivi2g02490 268 SUPERFAMILY Homeodomain-like 24 81 IPR009057 -
Vivi2g02490 268 FunFam Myb family transcription factor 23 81 - -
Vivi2g02490 268 NCBIfam myb-like DNA-binding domain, SHAQKYF class 24 79 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02490 Vivi-Chr2 114359399 114361654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02490 17 165 G2-like Transcription Factor Family AT4G13640 51.974 4.86e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vivi2g02490 Myb_DNA-binding 1.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02490 - - mtr:11409568 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02490 2 114359399 114361654 Vivi2g02490 2 114359399 114361654 ECH