Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02468 ATGGCAACAACATCACCGACAAACCCAGAACAACACGAACCGGCGCGACTCGCACAAACAAACTCCAAAACCGCTCTTAAATACCCCAAACCCAAACCACCCCAACGTTCACCTCCACAGTTACAAGAAACCTCAGAGTTAGTTAACTCTCTCAACATTCTAACCGCTCCCGATTTCTACGCCGTTCTCGACGTAGAACCCACCGCCGATTCCAACACTATTCGTAAACAGTATAACAAACTCTCTTCTCTTTTTCATCCGGACAATAACCGCCGCCACGTGGCATCGTGTAAAGAAGCTTTCAAGCTTGTTAACGACGCGTTTGGTGTTCTCTCTGATAAAGCTCTCAGAGAAAGCTACGACGGGAAGGTTGATCTTGAGATTAGAGAAAAGATGAGGACTTTTTGGACTGCGTGTTCTACTTGTAGGGTTTTGCATCAGTTTGAGAGAAGGTATTTGGGTCATAAGCTTGTGTGTCCTGGTTGTAATAAGAGTTTTAAGGCTGTTGAAGCTGTTGAGAATGATGGGTCTGAGGAGGATGAAGAGGATAACACTTTGGGGGAGTTTATGTTGAAGAATAAGAAGAGGAAGAAGAATGGGAAAGTGGGTTGTGAAAAAGGTGAGAGCTTTAAGGGTAATGGGAAAATGGGTTGTGAAAAAAGTGAGAGCTTTAAGGGTGATGGTGAAGTGAGTGGTGAAAAAGGTGTGAGCTTTAAGGGTAATGATGAAGTGGGTGTTGTTGGGAGAATGAGAATGAGAACGAGGAAGAGAACGCGATTGGTTGGGGAGGTTTTGGAGAGTTCTGAATCCAAGAAGGTTGATGTGAGTGAAGAGGAAACAATGACATTGGCTGATTTTCAATCGAAAGTGAAGACTAAGATTAAGGTTGAGAAAGAGAAAATGAAGGGATTGGAAATTGGAAAGGGTTTTGAAGTCAAGGAGAAGAAGGATGAGAGTTCTGTGAAGAGAAATGAGTTGAGACTTGAGAAGCATAAGGATTTTAGTGGAGAGGAATTACAAGCTATGGCGGTTGCGGATTCGGATTTTTATGATTTTGATAAAGATAGAGTAGTGAGGAGTTTTAAGAAAGGTCAAGTTTGGGCTGTGTATGATGGTGATGATGATGGAATGCCGAGGCAGTATGCTTTGATTGATGAAACTGTTTCGGCGAATCCTTTTCAAGTGAGGATAAGTTGGTTGGATTTACAGAACAACGGGGATGAAAAGATTGTTAGCAGGGAGAAATTAGGGTTTCATGTACCTTGTGGGAGGTTTAAAATTGCTAATAAGACTACAATTAGTTCTGTAAATGTTTTTTCTCATGTTGTGGAGTGTGATCGAGCAGCGCGTGAGGTTTACAAGATTTATCCTAAGAAGGGTTCGGTTTGGGCACTTTATAGTGAGGCGAGTCTTGATGGAGGTGAGGGAAAAAGATGCTATGATATTGTTGTGTTTTTGACAAGTTATAGTGAGATGAATGGTATGAGCATGGCATTTCTTGAGAAGGTTGATGGTTACAAGACAGTGTTTAAAAGACATGAGAGTGGAAGTTATGCTGTTAGATTTCTAGGTAAGGATGAATTTTGGTTACTTTCTCATCAGATTCCTGCGCAGAAATTTCCCTGCGACGAGGCTCCTGAATTGTTGAAAGACTGTTGGGAGCTTGATCCGGCTTCACTTCCTTCGGATTTACTGACTATTGGTGGAATAGATAATTGA 1719 0.4194 MATTSPTNPEQHEPARLAQTNSKTALKYPKPKPPQRSPPQLQETSELVNSLNILTAPDFYAVLDVEPTADSNTIRKQYNKLSSLFHPDNNRRHVASCKEAFKLVNDAFGVLSDKALRESYDGKVDLEIREKMRTFWTACSTCRVLHQFERRYLGHKLVCPGCNKSFKAVEAVENDGSEEDEEDNTLGEFMLKNKKRKKNGKVGCEKGESFKGNGKMGCEKSESFKGDGEVSGEKGVSFKGNDEVGVVGRMRMRTRKRTRLVGEVLESSESKKVDVSEEETMTLADFQSKVKTKIKVEKEKMKGLEIGKGFEVKEKKDESSVKRNELRLEKHKDFSGEELQAMAVADSDFYDFDKDRVVRSFKKGQVWAVYDGDDDGMPRQYALIDETVSANPFQVRISWLDLQNNGDEKIVSREKLGFHVPCGRFKIANKTTISSVNVFSHVVECDRAAREVYKIYPKKGSVWALYSEASLDGGEGKRCYDIVVFLTSYSEMNGMSMAFLEKVDGYKTVFKRHESGSYAVRFLGKDEFWLLSHQIPAQKFPCDEAPELLKDCWELDPASLPSDLLTIGGIDN 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02468 572 CDD DnaJ 58 113 IPR001623 -
Vivi2g02468 572 PRINTS DnaJ domain signature 60 78 IPR001623 -
Vivi2g02468 572 PRINTS DnaJ domain signature 78 93 IPR001623 -
Vivi2g02468 572 PRINTS DnaJ domain signature 96 116 IPR001623 -
Vivi2g02468 572 MobiDBLite consensus disorder prediction 1 26 - -
Vivi2g02468 572 PANTHER BNAC03G44070D PROTEIN 23 561 - -
Vivi2g02468 572 Gene3D DnaJ domain 49 141 IPR036869 -
Vivi2g02468 572 Pfam Domain of unknown function (DUF3444) 341 540 IPR024593 -
Vivi2g02468 572 Pfam DnaJ domain 58 121 IPR001623 -
Vivi2g02468 572 SMART dnaj_3 57 116 IPR001623 -
Vivi2g02468 572 MobiDBLite consensus disorder prediction 1 41 - -
Vivi2g02468 572 SUPERFAMILY Chaperone J-domain 52 122 IPR036869 -
Vivi2g02468 572 ProSiteProfiles dnaJ domain profile. 58 124 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02468 Vivi-Chr2 113584944 113589439 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02468 35 214 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.717 1.18e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02468 - - tpra:123909844 782.326