Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02456 ATGGCAACATCACCGACAAACCCAGAACAACACGAACCGGCGCGACTCAAATCTCTCGCTCAAACAAACTCCAAAACCGCTCTTAAATACCCCAAACCACAGTTACAAGAAACCTCAGAGTTAGTTAACTCTCTCAACATTCTAACTGCTCCCGATTTCTACGCCGTTCTCGACGTCGAACCCACCGCCGATTCCAACACTATTCGCAAACAGTATAACAAACTCTCTTCTCTTTTTCATCCGGACAATAACCGCCGCCACGTGGCATCGTGTAAAGAAGCTTTTAAGCTTGTTAACGACGCGTTTGGTGTTCTCTCTGATAAAGCTCTCAGAGAAAGCTACGACGGGAAGGTTGATCTTGAGATTAGAGAGAAGATGAGGACTTTTTGGACTGCGTGTTCTACTTGTAGGGTTTTGCATCAGTTTGAGAGAAGGTATTTGGGTCATAAGCTTGTGTGTCCTGGTTGTAATAAGAGTTTTAAGGCTGTTGAAGCTGTTGAGAATGATGGGTCTGAGGAGGATGAAGAGGATAACACTTTGGGGGAGTTTATGTTGAAGAATAAGAAGAGGAAGAAGAATGGGAAAATGGGTTGTGAAAAAGGTGAGAGCTTTAAGGGTAATGGGAAAATGGGTTGTGAAAAAGGTGAGAGCTTTATGGGTGATGGTGAAGTGAGTGGTGAAAAAGGTGTGAGCTTTAAGGGTGATGGTGAAGTGGGTGTTGTTGGGAGAATGGGAATGAGAACGAGGAAGAGAACGCGATTGGTTGGGGAGGTTTTGGAGAGTTCTGAATCCAAGAAGGTTGATGTGAGTGAAGAGGAAACAATGACATTGGCTGATTTTCAATCGAAAGTGAAGACTAAGATTAAGGTTGAGAAAGAGAAAATGAAGGGATTGGAAATTGGAAAGGGTTTTGAAGTCAAGGAGAAGAAGGATGAGAGTTCTGTGAAGAGAAATGAGTTGAGACTTGAGAAGCATAAGGATTTTAGTGGAGAGGAATTACAAGCTATGGCGGTTGCGGATTCGGATTTTTATGATTTTGATAAAGATAGAGTGGTGAGGAGTTTTAAGAAAGGTCAAGTTTGGGCTGTGTATGATGGTGATGATGATGGAATGCCGAGGCAGTATGCTTTGATTGATGAAACTGTTTCTGCGAATCCTTTCCAAGTGAGGATAAGTTGGTTGGATTTACAGAACAACGGGGATGAAAAGATTGTTAGCAGGGAGAAATTAGGGTTTCATGTACCTTGTGGGAGGTTTAAAATTGCTAATAAGACTACAATTAGTTCTGTAAATGTTTTTTCTCATGTTGTGGACTGTGATCGAGCAGCGCGCGAGATTTACAAGATTTATCCTAAGAAGGGTTCGGTTTGGGCGCTTTATAGTGAGGCGAGTCTTGATGGAGGTGAGGGCAAAAGATGCTATGATATTGTTGTGTTTTTGACGAGTTATAGTGAGATGAATGGTATGAGCATGGCATTTCTTGAGAAGGTTGATGGTTACAAGACAGTGTTTAAAAGACATGAGAGTGGAAGCTATGCTGTTAGATTTCTAGGTAAGGATGAATTTTGGTTACTTTCTCATCAGATTCCTGCGCAGAAATTACCCTGCGACGAAGCTCCTGAATTGTTGAAAGATTGTTGGGAGCTTGATCCGGCTTCACTTCCTTCGGATTTACTGACTATTGGTGGAATAGATAATTGA 1701 0.4209 MATSPTNPEQHEPARLKSLAQTNSKTALKYPKPQLQETSELVNSLNILTAPDFYAVLDVEPTADSNTIRKQYNKLSSLFHPDNNRRHVASCKEAFKLVNDAFGVLSDKALRESYDGKVDLEIREKMRTFWTACSTCRVLHQFERRYLGHKLVCPGCNKSFKAVEAVENDGSEEDEEDNTLGEFMLKNKKRKKNGKMGCEKGESFKGNGKMGCEKGESFMGDGEVSGEKGVSFKGDGEVGVVGRMGMRTRKRTRLVGEVLESSESKKVDVSEEETMTLADFQSKVKTKIKVEKEKMKGLEIGKGFEVKEKKDESSVKRNELRLEKHKDFSGEELQAMAVADSDFYDFDKDRVVRSFKKGQVWAVYDGDDDGMPRQYALIDETVSANPFQVRISWLDLQNNGDEKIVSREKLGFHVPCGRFKIANKTTISSVNVFSHVVDCDRAAREIYKIYPKKGSVWALYSEASLDGGEGKRCYDIVVFLTSYSEMNGMSMAFLEKVDGYKTVFKRHESGSYAVRFLGKDEFWLLSHQIPAQKLPCDEAPELLKDCWELDPASLPSDLLTIGGIDN 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02456 566 CDD DnaJ 52 107 IPR001623 -
Vivi2g02456 566 Pfam DnaJ domain 52 115 IPR001623 -
Vivi2g02456 566 Gene3D DnaJ domain 43 135 IPR036869 -
Vivi2g02456 566 SMART dnaj_3 51 110 IPR001623 -
Vivi2g02456 566 Pfam Domain of unknown function (DUF3444) 335 535 IPR024593 -
Vivi2g02456 566 SUPERFAMILY Chaperone J-domain 46 116 IPR036869 -
Vivi2g02456 566 PRINTS DnaJ domain signature 72 87 IPR001623 -
Vivi2g02456 566 PRINTS DnaJ domain signature 54 72 IPR001623 -
Vivi2g02456 566 PRINTS DnaJ domain signature 90 110 IPR001623 -
Vivi2g02456 566 ProSiteProfiles dnaJ domain profile. 52 118 IPR001623 -
Vivi2g02456 566 PANTHER BNAC03G44070D PROTEIN 30 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02456 Vivi-Chr2 113227366 113230581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02456 32 163 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.481 3.26e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02456 - - tpra:123909844 785.408