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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vivi2g02440
ATGGTAGAAGGAGGAAGAATGCGATTATCCGAGGAAGCTAGAAATGGGTTAGAATTTTTGAAACGTAAGAGGCTTCAGCGTGCACAAGCCGCCGCTGCCTCTCAGACTAATGTTGCTAACATGATGAATAGAAGTGGAGGAGATGCTTTGAGAGCTTCAGCTTCATGTGGCACAAGATTGCACAGTGATCCGGATGTGTTTTTCAAAAGGAAGGTGGATAAGTTTGATACAAGTGATTTGGAATGGACTGAGAATATTCCAGAGTGTCCTGTGTATTCTCCGACAAAGGAGGAATTTGAAGATCCTTTGATTTACTTGCAGAAGATAGCTCCAGAAGCTTCTAAATATGGTATATGCAAGATTGTTTCACCTTTGAGTGCTTCTGTACCTGCTGGGGTTGTTTTAATGAAAGAGAAAGCAGGATTTAAGTTTACAACTAGAGTACAGCCTCTTCGCCTTGCTGAGTGGGACACTGAAGACAAAGTCACCTTTTTTATGAGTGGAAGAAATTATACATTCCGCGATTATGAGAAAATGGCAAACAAGGTTTTCGCACGAAGATATTGCAGCTCTGGATGTCTTCCAGCCACTTACTTGGAAAAGGAGTTTTGGCATGAAATTGGTTGTGGGAAAATGGACACTGTTGAATATGCATGTGATGTTGATGGTAGTGCATTTTCATCTTCTCCTACTGATCAGCTTGGGAATAGCAAATGGAATTTAAAGAATCTTTCCCGTTTGCCCAAATCAACTTTGCGTCTCTTGGAAACTTCAATTCCGGGAGTAACAGAACCTATGCTATACATTGGAATGCTGTTTAGTATGTTTGCGTGGCACGTGGAGGATCATTATTTGTACAGCATTAATTACCAGCATTGTGGTGCATCAAAAACATGGTATGGTATCCCTGGTCATGCAGCTTTGGAATTTGAAAGGGTGGTGAGAGAACATGTGTATACTACTGATATTTTGTCAAGTGACGGGGAAGATGGAGCCTTTGATGTTCTCCTGGGGAAAACAACTTTATTTCCGCCTAATATTTTGTTGGAACATAAAGTCCCTGTCTATAAAGCTGTTCAAAAGCCAGGAGAGTTTGTCATAACCTTCCCTAGAGCATATCATGCAGGCTTCAGTCATGGTTTCAACTGTGGAGAAGCAGTGAATTTTGCTCTTGATGATTGGTTTCCTCTTGGGGCTATTGCGAGCCGGCGATATGCACTTCTTAACAGGGTTCCTTTACTGCCCCATGAAGAACTTCTTTGCAAAGAAGCAATGCTTATTCATTCAAGCGTGGAACTTGAAGATTCGGACTTTCCTTCCCCAGACTTGTTAGCGCCTAATAAAACAAAGATATCTTTCATTAATTTGTTGCGTTTCCAGCACTGTGCCAGTTGGTTACTTATGAAATCAAGGGCATGTACTAGTGTTTCTTCACATTCGCACGGCACAATTCTCTGTAGCCTGTGCAAACGTGACTGTTACATTGCTTATGTTGGCTGCAGCTGTCACATGCACCCTGTATGCCTACGTCATGAGGTTAAATCTCTTGACTTCAGCTGTGGGAAGAAGCACACTCTATATTTGAGAGAGGATATTGGGGACATGGAAGCTGCAGCCAAGATGTTTGAGCAGGAAGATGGGATATTGGATGAGATAGGCAAGCAATCCAAAAGCGAACAAAATATGTATTCATATCCTTTGTCAGATATGTTTCAGAGAGCTGAAACAAGTGGATATGAACCATATTGTGAGCTTAAATTTGATTCTATGATGGAGTTTTATACAGCTCCAGAACTGTCAACAAATAATCAAGAGTGTGGCACACAAAGTCAATTTGTATCAGGACATTACTCAGAAAACCATAAACCAGAAGTGTCTGAGGTTTCCTTTTCTGCTGCATCCACTCTTTGTTCTCTTTCAGAACATCTTGAGTGTTCCTCTGCTAATAAAGATGCCGAGGTGCAGACTAATTTGAAAGTGGGCATTATTGATTGCAAAGAACTTGGTGAAACAATATCCAACAATGCATGCGGATCTTCACTATTCCCTTCTCGGTATCATGAAAGTTCGGTTAAAGTGCATGATCTTCAGAAAGCCGATGTGAAGCCTATAGTGGATAATGACAGTGATGATTCTGATTCAGGAATATTTAGGGCAAAGCGCCCCGCTTCTCTAAAGGCCGAGAAAAGAAATTTGAAGGTTGTGGCAGTGAAACATTCTGAGCAGCAGGGACTTAAACGATTGAAGAAAGTCCTTCCTGAAGGAAAAAGCAACAGGCAACAGATGAATGTCAGAACCAGTGAATCAAGTTATAAATATAACCCAGTTAGTCACAAAGTTGATATTGGAATTTCCTTTAAGGACAGATTTGCAAGGGGAAATGACACTCCCATTCCTGTAAGATATAAAAAGTCAGGCAATGAGGAAGTAAGTATGAACATGCAACAAAATCACCACAGGAGAGAGAGGTTTCAGCAAACTTATAGAGAAGCGCCATCCATTGAGATTGGGTCTAAGCGACTTAAAGTCCGAGGCCCTTCATTTTTGGGCTTAGAGAGCAGGTTGAATTGA
2571
0.4127
MVEGGRMRLSEEARNGLEFLKRKRLQRAQAAAASQTNVANMMNRSGGDALRASASCGTRLHSDPDVFFKRKVDKFDTSDLEWTENIPECPVYSPTKEEFEDPLIYLQKIAPEASKYGICKIVSPLSASVPAGVVLMKEKAGFKFTTRVQPLRLAEWDTEDKVTFFMSGRNYTFRDYEKMANKVFARRYCSSGCLPATYLEKEFWHEIGCGKMDTVEYACDVDGSAFSSSPTDQLGNSKWNLKNLSRLPKSTLRLLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASKTWYGIPGHAALEFERVVREHVYTTDILSSDGEDGAFDVLLGKTTLFPPNILLEHKVPVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFALDDWFPLGAIASRRYALLNRVPLLPHEELLCKEAMLIHSSVELEDSDFPSPDLLAPNKTKISFINLLRFQHCASWLLMKSRACTSVSSHSHGTILCSLCKRDCYIAYVGCSCHMHPVCLRHEVKSLDFSCGKKHTLYLREDIGDMEAAAKMFEQEDGILDEIGKQSKSEQNMYSYPLSDMFQRAETSGYEPYCELKFDSMMEFYTAPELSTNNQECGTQSQFVSGHYSENHKPEVSEVSFSAASTLCSLSEHLECSSANKDAEVQTNLKVGIIDCKELGETISNNACGSSLFPSRYHESSVKVHDLQKADVKPIVDNDSDDSDSGIFRAKRPASLKAEKRNLKVVAVKHSEQQGLKRLKKVLPEGKSNRQQMNVRTSESSYKYNPVSHKVDIGISFKDRFARGNDTPIPVRYKKSGNEEVSMNMQQNHHRRERFQQTYREAPSIEIGSKRLKVRGPSFLGLESRLN
856
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vivi2g02440
856
Pfam
jmjN domain
90
122
IPR003349
-
Vivi2g02440
856
PANTHER
LYSINE-SPECIFIC DEMETHYLASE
81
812
-
-
Vivi2g02440
856
Pfam
JmjC domain, hydroxylase
266
389
IPR003347
-
Vivi2g02440
856
Pfam
C5HC2 zinc finger
486
537
IPR004198
-
Vivi2g02440
856
SMART
JmjN_1
88
129
IPR003349
-
Vivi2g02440
856
Gene3D
Cupin
89
442
-
-
Vivi2g02440
856
SUPERFAMILY
Clavaminate synthase-like
167
422
-
-
Vivi2g02440
856
SMART
cupin_9
236
406
IPR003347
-
Vivi2g02440
856
FunFam
Lysine-specific demethylase isoform A
84
433
-
-
Vivi2g02440
856
ProSiteProfiles
JmjC domain profile.
236
406
IPR003347
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vivi2g02440
Vivi-Chr2
112407888
112414879
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vivi2g02440
85
543
JUMONJI Transcription Factor Family
AT1G08620
33.150
1.03e-61
225
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TR
Jumonji
Vivi2g02440
JmjC
2.2e-39
CL0029
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vivi2g02440
-
-
psat:127119779
1646.71
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Vivi2g02440
2
112407888
112414879
Vivi2g02440
2
112407888
112414879
ECH
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