Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02437 ATGGAGCTATTTCCAGCTCAACCAGATTTATCTTTGCAAATTAGTCCTCCAAACACAAAACCAACATCAAGTAATTGGAAGAGAACATCATCAACAACAACTGAAGAAGAAATGGATTTGGGGTTTTGGAAAAGAGCTTTGGATTCAAGAAACTCTTTATCATCATCAATGGCTACTACTACTACTTCTACTACTACTAAAACTCATGATAATTACACTTTTGACCTCTCTCTTTCAAATCCAACAAAGCCTTTAGATTCAAACAACACTTCCTCCAATAACCTCATTCACCATCATCACTTCCAAAATAATGGCAACAACAACAATAATGCAATTGCAAACCCTTTTCAATCTTTTCAACAAAACCATTACTTTCAACACCCCCAACCTTTCTTTCAACACCACCATCCACAAAACCAAAGCTTAAGTCAAGAGCTTGGTTTTCTTAGACCTATTAGAGGAATTCCTGTTTATCAAAACCCTCCTCCTTTGTCATTCCCTCAACTTCATAATCATAACCATAATCTCAATCATAACCTTAATCATAACCTTAATCATAGCCTTAATCATAGCCTTAATCATCTTCATGTTCTTGATGGCTCCACTACTACTACTACACCTTCTTCTATTTCTAACATAAACTCAAACTCAACCCCTTTTCAATCTCAAGCTTTGATGAGGTCAAGATTCTTGTCTAGATTTCCTGCAAAAAGAAGCATGAGAGCTCCAAGGATGCGTTGGACTACTACACTTCATGCTCGATTTGTTCATGCTGTTGAACTCTTAGGTGGCCATGAAAGGGCAACTCCAAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTAACATTAGCACATGTTAAGTCTCATTTACAGATGTATCGGACGGTGAAAACTACAGATAGAGTAGGGGCTTCATCAGGGCAATCGGATGTATACGATAATGGATCGTCTGGAGATAATTCTGATGATATAATGTTTGACATCAATTCTTCAAGAAGATCATCTGAATTATCCATTAAGCAGCAAGGAAGATCAAGTGTTAATCAAGATAAGGAATGTTATGGTCTTTGGAGCAACTCATCTAGGGAAGCTTGGTTACATGGCAAACCAAAGGTTGATTCTATTGGAAACATGCAATCTCTTGAGAAGGAAATGGATCCAAAGTGTTTAAGCTATGAGAGAATATCAGATGGAAGTTCATCTACAAACCTATCAGGGTCAAGTCCAAAGAAACCTAATTTGGATTTGGAATTCACCTTAGGCCAGCCTCTTTGA 1278 0.374 MELFPAQPDLSLQISPPNTKPTSSNWKRTSSTTTEEEMDLGFWKRALDSRNSLSSSMATTTTSTTTKTHDNYTFDLSLSNPTKPLDSNNTSSNNLIHHHHFQNNGNNNNNAIANPFQSFQQNHYFQHPQPFFQHHHPQNQSLSQELGFLRPIRGIPVYQNPPPLSFPQLHNHNHNLNHNLNHNLNHSLNHSLNHLHVLDGSTTTTTPSSISNINSNSTPFQSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRVGASSGQSDVYDNGSSGDNSDDIMFDINSSRRSSELSIKQQGRSSVNQDKECYGLWSNSSREAWLHGKPKVDSIGNMQSLEKEMDPKCLSYERISDGSSSTNLSGSSPKKPNLDLEFTLGQPL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02437 425 MobiDBLite consensus disorder prediction 11 31 - -
Vivi2g02437 425 MobiDBLite consensus disorder prediction 1 37 - -
Vivi2g02437 425 MobiDBLite consensus disorder prediction 51 72 - -
Vivi2g02437 425 NCBIfam myb-like DNA-binding domain, SHAQKYF class 243 296 IPR006447 GO:0003677
Vivi2g02437 425 Gene3D - 242 299 - -
Vivi2g02437 425 MobiDBLite consensus disorder prediction 301 327 - -
Vivi2g02437 425 FunFam Myb family transcription factor 241 299 - -
Vivi2g02437 425 SUPERFAMILY Homeodomain-like 240 296 IPR009057 -
Vivi2g02437 425 MobiDBLite consensus disorder prediction 395 413 - -
Vivi2g02437 425 MobiDBLite consensus disorder prediction 387 425 - -
Vivi2g02437 425 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 424 IPR044847 GO:0000976|GO:0006355|GO:0010158
Vivi2g02437 425 Pfam Myb-like DNA-binding domain 244 295 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02437 Vivi-Chr2 111937674 111943466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02437 1 424 G2-like Transcription Factor Family AT4G17695 37.850 3.41e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vivi2g02437 Myb_DNA-binding 2.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02437 - - psat:127119781 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02437 2 111937674 111943466 Vivi2g02437 2 111937674 111943466 ECH