Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02379 ATGGCTCCTTCTTTTGATGTAACTTCTCACACTGTTTGTGTTATGGATGCTTCCGGTCAATTAGGGTTTAGTCTTGTTCAAAGACTTCTTCAAAGAGGTTACACCGTTCATGCCTCCATTCAAAAATATGGAGAAGATCTATTCAATGGAGTTTCGGCTGATTCTGATAAACTCAAGATTTTTCGATCGGATCCTTTTGATTATCATAGCATAATTGATGCTCTTAGAGGTTGCTCTGGTTTGTTCTACTCGTTTGAACCTCCTCTTGACCAACCCAATTATGATGAATACATGGCTGACGTGGAAGTTAGAGCAGCACACAACGTGCTTGAAGCTTGTGCTCAAACAGAAACCATAGACAAAGTTGTTTTCACTTCCTCAGCAACTGCTGTTGTTTGGAGGGAAGATCGTAAAACCATTGAACCTGATATGGATGAAATTCATTGGAGTGATGTCAATTTTTGTCGCAAATTTAAGTTATGGCATGGGATGTCAAAGACACTAGCAGAGAAAACCGCGTTTGCATTAGCAATGGACAGAGGAGTGAACATGGTGTCCATCAATGCAGGATTATTAATGACTCATGACCTTTCCATCAAACACCCTTATTTAAGAGGAGCTGCTGAAATGTACGAAGATGGTGTCTTTGTGACCGTTGATTTAGGTTTCTTGGTGGATACCCACATCTGTGTCTACGAGGATGTCTCATCCTACGGTCGTTATTTATGCTTCAATCATATTATTAATACTCAAGATGACGCCGTTCAGCTCGCACACAAATTAACCACTACTGCATCTTCTTCCATACCCCAAAGCGATGACTATGGAAAGAGATTCATTGAACAGAAAATAAGCAACAAGAAGTTGAACAAATTAATGGTGGACTTTGAAGCTTAA 897 0.3991 MAPSFDVTSHTVCVMDASGQLGFSLVQRLLQRGYTVHASIQKYGEDLFNGVSADSDKLKIFRSDPFDYHSIIDALRGCSGLFYSFEPPLDQPNYDEYMADVEVRAAHNVLEACAQTETIDKVVFTSSATAVVWREDRKTIEPDMDEIHWSDVNFCRKFKLWHGMSKTLAEKTAFALAMDRGVNMVSINAGLLMTHDLSIKHPYLRGAAEMYEDGVFVTVDLGFLVDTHICVYEDVSSYGRYLCFNHIINTQDDAVQLAHKLTTTASSSIPQSDDYGKRFIEQKISNKKLNKLMVDFEA 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02379 298 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 4 298 - -
Vivi2g02379 298 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 289 - -
Vivi2g02379 298 Gene3D - 4 298 - -
Vivi2g02379 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 262 IPR036291 -
Vivi2g02379 298 CDD FR_SDR_e 12 294 - -
Vivi2g02379 298 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 14 147 IPR002225 GO:0003854|GO:0006694|GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02379 Vivi-Chr2 110059428 110062192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02379 11 296 Monolignol Biosynthesis Gene Families AT5G58490 30.263 9.23e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02379 - - gmx:100790333 547.74