Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02376 ATGGCAATTGAAAACCAAGACAACACCTCTGTCAGAGAAATCAAACCAAAAAACAGAAGAATCATGGGTGCTGGAGGTCCTGAAGAGGATGATAATAGATGGCCACCATGGTTGAAACCTTTACTGAAAGAAAATTTCTTTGTTCAATGCAAGTTACATGCTGATTCACACAAAAGTGAATGTAACATGTATTGTTTGGATTGTATGAATGGTCCTATCTGTTCACTCTGTCTTGCATACCATAAAGATCATAGTTTCATTCAGATTAGAAGATCTTCATACCATGATGTGATTAGGGTGAATGAGATTCAGAAGGTATTGGACATTACTGGTGTTCAAACCTACATTATCAACAGTGCAAGAGTTGTTTTCTTGAATGAAAGGCCTCAGCCAAGGCCAGGGAAAGGTGTCACAAACACTTGTGAAGTTTGCGAGCGTAGTCTTCTCGATTCCTTCCGGTTCTGCTCTCTTGGTTGCAAGATTGTAGGAACATCTAAGAATTTCCAGAAGAGAAAGAAACAGATAACAGCAATGGCATCAGATTCTGAAGATTCATACAGTAGCAACAACAGCAACAACCACATTCATAGCCGTCAGAAGAAAATCAAAGTTCAAAGCTTCACACCATCAACACCACCTCCAACTTCTGTTAATTACAGAACAGCCAAGAGAAGAAAGGGAATACCACATAGAGCCCCATTGGGGATAGATAATTGGTATTATTAA 726 0.3926 MAIENQDNTSVREIKPKNRRIMGAGGPEEDDNRWPPWLKPLLKENFFVQCKLHADSHKSECNMYCLDCMNGPICSLCLAYHKDHSFIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSKNFQKRKKQITAMASDSEDSYSSNNSNNHIHSRQKKIKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPLGIDNWYY 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02376 241 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 30 234 - -
Vivi2g02376 241 MobiDBLite consensus disorder prediction 176 228 - -
Vivi2g02376 241 MobiDBLite consensus disorder prediction 176 195 - -
Vivi2g02376 241 MobiDBLite consensus disorder prediction 202 218 - -
Vivi2g02376 241 CDD Bbox2 50 89 - -
Vivi2g02376 241 MobiDBLite consensus disorder prediction 10 30 - -
Vivi2g02376 241 Pfam PLATZ transcription factor 90 161 IPR006734 -
Vivi2g02376 241 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02376 Vivi-Chr2 109811151 109813535 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vivi2g02376 PLATZ 4.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02376 - - gmx:100791221 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02376 2 109811151 109813535 Vivi2g02376 2 109811151 109813535 ECH