Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02375 ATGGATGGTGGTGACGTTATTGGCCATGGAGTAATGCAAGTTAACTCTGAAGCACACGATGGGATTTTTCATGAGAATGGTCGTGTTAACGATGACGGTGAACTGGATTTTGTTAATGCGGAAGAAGATAATGAATTTTACGGATGTGAATACGATGATGAAGATGGAGATGATGATGGCGAATTAGATGGTGATGATTATGATGACGAGATAGGTTCCGGTTATGTTAGTGGACACGAATATTGGAATACAGATTCAAACAGCGGTGGAATTTCTGGGGAAGGATCGGAATGGGGTTCGGACAGATTGAATGAATCGATATCTTCAGATCAACTTCCAGACGAATCATTTGTTGTTGACGAGTTTGACGACATTGCAAATATGGACATGTTTAACTTGCAATGTGATGATGTTTCGAAGCTGCAATTTGGAAGTCTGGAAATAGCTTACACATGGTACTGTTGGTTTGCAAAGATGAACGATTTTGCAGTCCGTAAAGGTCAAGTTATTAAAAAAAAGAGTGGAGATGTTACTCAACAAACATTTCTTTGTAACCTTGCAGGATTCAGGCAAAACAAAGTAGATAATCGCAAACGTGGTCCGAGGCACGAAACCCGGTGTGGATGTGAAGCAAAATTTCGGGTTCATATTGATATAATTTCACACCGTTGGTATGTCACAGTTTTTACCTTTGAGCACAATCATGCAATGTTAAAGGAGAAGCACTGCAGGCTGTTGGCAGGTAATAGGAAGCTTAGTAAGTCAGATAAGATGCAAATTAAGAATTTTGGGAATGCCGGAATCAAAGTAACTCAAATGATTGGTTCATTCGCTAATGCTGCCGGGGGGTATGATAAGGTAGGATTTTTGAAGAAGGATGTACATAATCAAATTGCAAGACAAAGGAAAGAGATGTCTTCTGATGCTAAAGGTGCTGTCAGGTATCTTATTGATCTTCGTGTAATAGATCCATTGATGCTTGTTGCACACACGGTGGGTGCGGATGGAACGTTGCAAAACCTATTTTGGAGCGACGGTGAGAGTCAAAAGAATTATGAACTGTTTGGTGATGTGCTTGCTTTTGATGCTACCTACAAGAAAAATAAGTACAGGTGCCCATTTGTTGTTTTTTCTGGTGTTAATCACCATAACCAGACGATTATATTTGCTACTGCCATAGTTTCAAATGAGGTTGAAGGGACATATGTATGGTTGCTGGAGCAGTTTTTGGTTGCAATGAAAGGTAAGACACCTTTATCTGTAATAACGGACGGTGATGTTGCTATGAGAAATGCAATCAGGAAAGTCTTTCCCAACAGTTACCACAGGTTATGTGCATGGCATCTCCTACGAAATGCAATTTCCAACATTAGCAATCCCAATTTCATCCCTGTTTTCAAAAAATTAATGCTTGGTGATCACGATGTTTGGAAATTTGAGAGTCTGTGGAATGAAATGTTAGATAGGTTTGGGTTAGAAGATAATAATTGGATCAATGAATTGTACCAGAAAAGGAAGATGTGGGCAACAGCTCATATTAGGGGAAATTTCTTTGCAGGAATAAGAACGACATCGCGGTGCGAAGCATTTCATAGTCATATGGGACAATTTATACACTCGAGGATGAATATGACTGATTTTGTTAAGCAGTTTCATAGGTGTGTGGCATATTTTCGATTTAGAGAGGTTCAAGCTGATTTTGAATCCCAATATGGACAGGCAGTGTTGCATACCAATCTTAGGGCGCTTGAGAGGTCAGCATCAAAGCACTGGACAAAAGAGATATTTGAAATGGTACGATCTGTTATGAAAAAGGTAACCTTAACATCTGTATTAGATATTCAAGATATGGCATCAGTTACCATTTATGCGGTGACAAAATACAGAGACGAAGGGCATGGATGGCGTGTTTCCCACTGTCCATCGAATAACGATTTCAGATGCTCGTGTCTTAGAATGGAATCCATTGGGATTCCTTGTGAGCACATTGTTGTTGTGATGGTTTATCTTAATATTGTAGAATTTCCTGAGAATCTTGTGCTGAATCGTTGGTCATTATATGCGAAGGAGTCTATTAGTGGAAGTTATGAAGATGGTTCCCACTACTGGGATTCACATTTGGTTGCTAGACACGCTACTTTGGTGAATCTTAGTAAGGAGGTCGCTGACTTGTCATATATGGATGTTGATGATTACAAAAAATATTTAGAATATCTGACTAATGAACTTTGTAGGCTTAAATCGAAGTACAACAATGAAGATGTTCCAGATAACATACATGTTGAAGAGGAGTTGGTGAATATACTTAACCCTTCATGTTCAAGAAGCAAGGGTTGTGGACCAGGTACTGTTGGTACATCAGAGAGACCCAGGCGGACACAAACGTGTGGGATATGCGGTGCAGCTGGTCACAACAGAAGATGCTGCCCTACTCTTGGAGCAGATGGAGAGCCTCCTGCAGATAGTTCTTTACAATCAGCATCTGTAAGGTTAAGTAATGACTATGGATTTTCAGTTTGA 2520 0.3984 MDGGDVIGHGVMQVNSEAHDGIFHENGRVNDDGELDFVNAEEDNEFYGCEYDDEDGDDDGELDGDDYDDEIGSGYVSGHEYWNTDSNSGGISGEGSEWGSDRLNESISSDQLPDESFVVDEFDDIANMDMFNLQCDDVSKLQFGSLEIAYTWYCWFAKMNDFAVRKGQVIKKKSGDVTQQTFLCNLAGFRQNKVDNRKRGPRHETRCGCEAKFRVHIDIISHRWYVTVFTFEHNHAMLKEKHCRLLAGNRKLSKSDKMQIKNFGNAGIKVTQMIGSFANAAGGYDKVGFLKKDVHNQIARQRKEMSSDAKGAVRYLIDLRVIDPLMLVAHTVGADGTLQNLFWSDGESQKNYELFGDVLAFDATYKKNKYRCPFVVFSGVNHHNQTIIFATAIVSNEVEGTYVWLLEQFLVAMKGKTPLSVITDGDVAMRNAIRKVFPNSYHRLCAWHLLRNAISNISNPNFIPVFKKLMLGDHDVWKFESLWNEMLDRFGLEDNNWINELYQKRKMWATAHIRGNFFAGIRTTSRCEAFHSHMGQFIHSRMNMTDFVKQFHRCVAYFRFREVQADFESQYGQAVLHTNLRALERSASKHWTKEIFEMVRSVMKKVTLTSVLDIQDMASVTIYAVTKYRDEGHGWRVSHCPSNNDFRCSCLRMESIGIPCEHIVVVMVYLNIVEFPENLVLNRWSLYAKESISGSYEDGSHYWDSHLVARHATLVNLSKEVADLSYMDVDDYKKYLEYLTNELCRLKSKYNNEDVPDNIHVEEELVNILNPSCSRSKGCGPGTVGTSERPRRTQTCGICGAAGHNRRCCPTLGADGEPPADSSLQSASVRLSNDYGFSV 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02375 839 Pfam MULE transposase domain 358 452 IPR018289 -
Vivi2g02375 839 SMART 26again6 646 673 IPR006564 GO:0008270
Vivi2g02375 839 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 138 727 IPR031052 GO:0006355
Vivi2g02375 839 Pfam SWIM zinc finger 647 670 IPR007527 GO:0008270
Vivi2g02375 839 MobiDBLite consensus disorder prediction 84 104 - -
Vivi2g02375 839 Pfam FAR1 DNA-binding domain 152 238 IPR004330 -
Vivi2g02375 839 ProSiteProfiles Zinc finger SWIM-type profile. 623 671 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02375 Vivi-Chr2 109779162 109781854 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi2g02375 MULE 2.9e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02375 - - vvo:131598033 1238.02