Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02367 ATGAATCTCTGGAGCGACGATAACTCTTCAGTCATGGAGGCTTTCATGACATCCTCCGATTTATCCACCTTATGGCCACCGGCGCCGCCGTCACAGCCGCCACAAACATCCACCGGATTCAACCAAGACACGCTGCAGCAACGACTTCAGGCTTTGATAGAAGGCGCATCGGAGCTCTGGACCTACGCTATCTTCTGGCAGCCGTCTTATGACTATTCTGGCTCCTCTCTTCTCGGTTGGGGTGACGGTTACTACAAAGGAGAAGAAGATAAAACAAAAGCGAAATCAAAAGCAAAATCACCTGCTGAACAAGAACACCGGAGAAAAGTTCTCCGGGAACTTAATTCTCTAATCTCCGGTAATCCGGTCACCGACGAATCCGCCGTCGATGAAGAAGTAACGGATACCGAATGGTTCTTCTTAGTTTCTATGACTCAATCTTTTGTCAACGGCGGCGGACTTCCCGGACAGGCTTACTTTAACTCAACTCCGGTGTGGTTGGTCGGCGGGGAGAGTCTCTCTATCTCGGCGTGCGAGAGAGCGAGACAAGGTCAGGAATACGGTTTACAGACGCTGGCGTGTATACCGTCGGCCAACGGTGTTTTGGAGCTTGGATCTACGGAGTTGATTTATCAAAACAATGATTTGATGAATAAAGTGAAGATGCTTTTCAATTTCAATAATAGCTTTGAGTTTGGATCTTCTTGGCAGTTAGGTAATTCTAATTCTGCTGCAATAGCTCATCAAGGTGAAAATGATCCTTCTTCGATTTGGATTAACGATCCTGAAGCTAGAGATTCTGTTGATAATAATTCTCTTGCTGCAACAACAACAACGACGACCAACACTTCGATTTCAAATCCAAGTCATCAACAACATCAGCACCAACACCAGCACCAAGCTCAGAACAATAACAATAATCAGAGTTTGAGTGTGAGTGTGACGAAGACGATACAATTTGAAACTCATGCTTCAAGTACTGTCACAGAAGTTCCTAGTGTTGTTCATGTTTCAAGCAAGCAGAATAATCAAAGTTTCTTTAATAAGGAAATGAATCTTTCTGATTATGGTGGGAGTAACAATCATCAACGTTCGTTGAAGCCGGAATCTGGTGAGATTTTGAGTTTTGGAGGTGAGAGTAAAAAGAGTTGTTATGTTACTAATAATGGAAATTCGAATTCGAATTTCTTCTCGGGTCAATCACATATAGTTTCGGTTGCTGAGGAAAACCACAACAATAACATCAACAACGGAAACGGAAAGAGGAGGTCGCCGAATTCGAGAGGAAGCAACAACGATGATGGAATGTTATCTTTTACTTCAGGTGTAATTGTCCCACCGGCTGCGTCGAATTTGAAATTCTCGGGTGGTACTGGTTGTGGTGATTCGGACCATTCGGATCTGGAGGCGTCGGTGGTGAAGGAGGTGGATAGCAGTCGTGTGGTGGAGCCGGAAAAGAAGCCGAGGAAGAGAGGAAGGAAACCGGCAAATGGAAGAGAAGAACCGTTGAATCATGTTGAAGCTGAGAGACAGAGAAGAGAGAAGCTGAATCAGAGATTCTATGCTCTCCGTGCCGTTGTTCCTAATGTTTCAAAGATGGATAAAGCTTCACTTTTGGGAGATGCTATATCTTATATTACTGAGCTGAAAACAAAGCTTCAGAAAACAGAATCCGATAAAGATGGATTGGAAAAGCAATTTGATGAAGTCAAGAGTGAGCTTCAGAAAATCAATGAAAACTCGTCTCATCCCCCATCCGCACCACCACAACAGCAACAACCACAGCCCAAAAAACCATCAGCTTCCAATCAAGCTTTAATTGATTTGGATATCGACGTCAAGATAATAGGTTGGGATGCAATGATAAGGATCCAATGCAGTAAGAAAAACCACCCTGCAGCGAGGTTGATGGCGGCGTTAATGGAGCTTGACCTAGAAGTGCACCATGCTAGTGTGTCTGTGGTAAATGACTTGATGATACAACAAGCAACCGTGAAGATGGGGAGTCGTTTTTACACCCAGGAGCAGCTTCGGGCAGCATTGTCCTCTAAAGTTGGGGATGCTCAATAA 2070 0.444 MNLWSDDNSSVMEAFMTSSDLSTLWPPAPPSQPPQTSTGFNQDTLQQRLQALIEGASELWTYAIFWQPSYDYSGSSLLGWGDGYYKGEEDKTKAKSKAKSPAEQEHRRKVLRELNSLISGNPVTDESAVDEEVTDTEWFFLVSMTQSFVNGGGLPGQAYFNSTPVWLVGGESLSISACERARQGQEYGLQTLACIPSANGVLELGSTELIYQNNDLMNKVKMLFNFNNSFEFGSSWQLGNSNSAAIAHQGENDPSSIWINDPEARDSVDNNSLAATTTTTTNTSISNPSHQQHQHQHQHQAQNNNNNQSLSVSVTKTIQFETHASSTVTEVPSVVHVSSKQNNQSFFNKEMNLSDYGGSNNHQRSLKPESGEILSFGGESKKSCYVTNNGNSNSNFFSGQSHIVSVAEENHNNNINNGNGKRRSPNSRGSNNDDGMLSFTSGVIVPPAASNLKFSGGTGCGDSDHSDLEASVVKEVDSSRVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQKTESDKDGLEKQFDEVKSELQKINENSSHPPSAPPQQQQPQPKKPSASNQALIDLDIDVKIIGWDAMIRIQCSKKNHPAARLMAALMELDLEVHHASVSVVNDLMIQQATVKMGSRFYTQEQLRAALSSKVGDAQ 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02367 689 MobiDBLite consensus disorder prediction 278 302 - -
Vivi2g02367 689 PANTHER MYC 13 684 IPR045084 GO:0003700|GO:0006355
Vivi2g02367 689 MobiDBLite consensus disorder prediction 455 510 - -
Vivi2g02367 689 MobiDBLite consensus disorder prediction 467 510 - -
Vivi2g02367 689 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 503 570 IPR036638 GO:0046983
Vivi2g02367 689 FunFam Transcription factor bHLH13 493 567 - -
Vivi2g02367 689 MobiDBLite consensus disorder prediction 411 441 - -
Vivi2g02367 689 MobiDBLite consensus disorder prediction 572 602 - -
Vivi2g02367 689 Pfam Helix-loop-helix DNA-binding domain 504 549 IPR011598 GO:0046983
Vivi2g02367 689 Gene3D - 492 581 IPR036638 GO:0046983
Vivi2g02367 689 SMART finulus 506 555 IPR011598 GO:0046983
Vivi2g02367 689 CDD bHLH_AtAIB_like 497 573 - -
Vivi2g02367 689 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 500 549 IPR011598 GO:0046983
Vivi2g02367 689 MobiDBLite consensus disorder prediction 411 438 - -
Vivi2g02367 689 Coils Coil 546 580 - -
Vivi2g02367 689 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 45 224 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02367 Vivi-Chr2 109208343 109210965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02367 1 686 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 52.235 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi2g02367 bHLH-MYC_N 1.6e-53 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02367 K13422 - gmx:100776289 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02367 2 109208343 109210965 Vivi2g02367 2 109208343 109210965 ECH