Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02302 ATGGAAGTTGTTAAAGGTGATAAAGATTCTGTTGTTGAAGAAAATGAAGAGAATTTTGGAGCTAGTGATAGTAAAGAACCAGTCATTGGAATGGAATTTGAGTCACAGGAAAATGCATATTCATTCTACATTGATTATGCTAAATCAGTTGGGTTTGGAATTTCAATTAAAACTAGTCGTCGATCAAAGGTTTCTATGGAGTTTATCGATATTACATATGCTTGCACAAGATATGGAAAAAAGAGACCATCCATTGCACATAATCCACGTCCTTGTTTGAAGTTGGAGTGTGAAGCTAGCTTGCGTATTAAAAGAAACTGTGATGGCAAGTGGAGTATTCACAGTTTCATTAAAGATCACAATCATGATCTTTTTCCAACATATGCACATTATTTCCCTTGCCATAGAAGAATCAATAAAGCTCAAAAGAATTGTATTGAAACTTTACAACAAGTTGGGGTGAGAACAACAAAAATTTACGCCACAATGGCCAAACAACATGGAGGATATGAAAATATTGGTTGTTTGGAGAAAGATGTTAGAAATCATTTAGATAAAGATCGTCGTTTGAGTTTAGAATTGGGAGATGCAACTGCAATGTTGGAGTGTTTTATGCTTATGCAAGAAGAAAATCCAAGATTTTTTTATGCAATTGATTTGGATGATGAAAACCGTCTTAAAAATGTGTTTTGGGTAGATGCAAAAGGAAGAGATGATTATCAAGAGTTTGGAGATGTGATCTCATTCGATACAACATATATCACTAATAAGTACAAAATGCCATTTGCTCCTTTTATTGGTGTGAATAATCACTTTCAGTCAAGATTACTTGGTTGCGCGTTACTAGTTGATGAAACCTCAAATACATTCATATGGTTGATGAAAACGTGGCTTAGAGCAATGGGTGGAAAACCTCCAAATGCAATAATAACTGATCAAGATAAGGCTATGAAAGTTGCAATTAAAGAGGTATTTCCAAATACTCGACATCGATTTTGTCTTTGGCATATACTTAGAAAGGTTCCTGAGAAGCTTAGTCACGTATTAAGAAAAAATTCCGACTTCATGAGATATCTCAACTCATGCATTTACAAGTCTTGGTCAAAGCAGGAATTTGAAGATAAATGGCAAGAAATGGTGGAAATATTCCAGCTACGCGGGGATGCTTGGATTGAATCTTTATATGATGAGCGTGAGCATTGGGTTCCCGTTTACATGAAGGATACTTTTTTTGGTGGTATGTCAACGACTCAGAGATCAGAAAGCATTAATTCATTTTTTGACAAATACGTCTGTAAGAAAACTACCTTAAAAGAATTTGTTGAAAAATACAAAGTTGCTTTGACGGATAGAGAAGAGGCAGAAAAACTAGCTGACTTTAATACTTGGCACAAGCAACCTGTTCTTAAAACTCCTTCCCCTTTTGAAAAGCAAATGTCAGTGATTTACACACATGAAGTATTTAAGAGATTTCAAGTAGAAGTTTTGGGATTATCAGGCACTCTTGTTTTGAAAGAGCATAAAGATGATCAAATTACTACATTTAAAATCTTGGACTTTGAGAAAAATGAGGAGTTTGATGTAGAATGGAATGCATCAAAAGAGGAAATTTCTTGCTTATGTCGCTCATTTGAGTTTAATGGATATCTATGTCGACATTCATTGATGGCACTTTTAGTTGCTGGTGTCTTTGTTGTTCCATCACACTACATATTAAGAAGATGGACTAAAGATGTTAGAAGTAACCATAATAGGAGAAAAATGAATGAAGATGTTGGTTCAGATAAAGAGAGATTTGATTGTTTATATGAAAAGGCTATTGAATTTATTCATGAAGGGTCATTAAGTAATGAGAGTTACAATTTTGCTTGTAAGGTTTTTGAGGAGACCTTACCCCAATGTGCAACTATTAATAAATCTTTGAAGATCAACAAAGAAAATGTTAGAAAGAATGTTTTACCTTTGAAGTCACTACTTGATCCTCAAGTATCAAAAACAAAAGGGGCTCCAAAAAGAATGAAGAGTGGAATCGAAAAAGGATTGTTAATTCTAAGACATGATGATTCTAAATGCAAGATGAGTTGGTTTAATGATGTTGGCATTATCATCACAGGGAATATCAATTTGAGTTACAAATTTTGTGATGTAAAAGTTACAACTTTTAGCGGTTTTGGATTTTATAATGTAAAAGTTACAAATTTTAGTGCTGTTGGATTTTGTGATGTTAAAGTTACAAATTTTGTTGGACACATTTTAGTGTCAATTTTGTTACTGATTCAGTACTTTTAA 2289 0.3351 MEVVKGDKDSVVEENEENFGASDSKEPVIGMEFESQENAYSFYIDYAKSVGFGISIKTSRRSKVSMEFIDITYACTRYGKKRPSIAHNPRPCLKLECEASLRIKRNCDGKWSIHSFIKDHNHDLFPTYAHYFPCHRRINKAQKNCIETLQQVGVRTTKIYATMAKQHGGYENIGCLEKDVRNHLDKDRRLSLELGDATAMLECFMLMQEENPRFFYAIDLDDENRLKNVFWVDAKGRDDYQEFGDVISFDTTYITNKYKMPFAPFIGVNNHFQSRLLGCALLVDETSNTFIWLMKTWLRAMGGKPPNAIITDQDKAMKVAIKEVFPNTRHRFCLWHILRKVPEKLSHVLRKNSDFMRYLNSCIYKSWSKQEFEDKWQEMVEIFQLRGDAWIESLYDEREHWVPVYMKDTFFGGMSTTQRSESINSFFDKYVCKKTTLKEFVEKYKVALTDREEAEKLADFNTWHKQPVLKTPSPFEKQMSVIYTHEVFKRFQVEVLGLSGTLVLKEHKDDQITTFKILDFEKNEEFDVEWNASKEEISCLCRSFEFNGYLCRHSLMALLVAGVFVVPSHYILRRWTKDVRSNHNRRKMNEDVGSDKERFDCLYEKAIEFIHEGSLSNESYNFACKVFEETLPQCATINKSLKINKENVRKNVLPLKSLLDPQVSKTKGAPKRMKSGIEKGLLILRHDDSKCKMSWFNDVGIIITGNINLSYKFCDVKVTTFSGFGFYNVKVTNFSAVGFCDVKVTNFVGHILVSILLLIQYF 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02302 762 MobiDBLite consensus disorder prediction 1 21 - -
Vivi2g02302 762 SMART 26again6 537 564 IPR006564 GO:0008270
Vivi2g02302 762 Pfam FAR1 DNA-binding domain 41 126 IPR004330 -
Vivi2g02302 762 Pfam SWIM zinc finger 533 561 IPR007527 GO:0008270
Vivi2g02302 762 ProSiteProfiles Zinc finger SWIM-type profile. 526 562 IPR007527 GO:0008270
Vivi2g02302 762 MobiDBLite consensus disorder prediction 1 22 - -
Vivi2g02302 762 Pfam MULE transposase domain 246 339 IPR018289 -
Vivi2g02302 762 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 15 634 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02302 Vivi-Chr2 106374265 106376743 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi2g02302 MULE 1.2e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02302 - - vvo:131649741 1572.76