Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02300 ATGTCAAGCACCCCACAAGTTATTACATGCAAAGCTGCGATATGTTGGGAGGTTGGCAAACCAGCAATAGTAGAAGAGATACAAGTAGATCCACCAAAAGCAACAGAAGTTCGAGTTAAGATGCTTTGTGCTAGTCTTTGCCACACAGATATCTCAAGCCTTCAAGGAGTTCCACATAATAAATTTCCTCTAGCACTTGGACATGAAGGAGTAGGTGTTGTGGAGAGTGTTGGAGATGAAGTGAAAAATCTAAAAGAAGGGGATCTCATAATTCCAACATATGTAGGAGAGTGTAAAAAATGCGAGAATTGTGTTTCAGGGAAAACCAATCTTTGTCTGACATATCCAGTCAGACTCACTGGCCTAATGCCTGACAACACTTCAAGGTTGTCCATTAAAGGCCAGAGACTATATCATGTTTTGAGTTGTGCTACATGGTCAGAGTATGTGGTTGTTGATGTCAACTATCTACTCAAAGTTGATCCAACCATTAATCTAGCTTATGCAAGTTTCATCTCATGTGGGTTTGCAACTGGATATGGAGCTGCATGGAAGGAAGCTAGGGTTAAAAGTGGTTCAACTGTTGTTGTTTTTGGTCTTGGAGCTGTTGGATTAGGGGCTATAAGTGGAGCAAAAATGATGGGAGCAAGTAAAATAATTGGAGTGGACAAAAATGAGATGAAGAGAGAAAAAGGAGAAATTTTTGGACTGACCCATTTTATAAATCCAAGTGATTCTGATAAATCTGCTTCAGAATTGGTCAAAGAAGTAAATGGTGGAATTGGTGTGGATTACTCTTTTGAGTGCACTGGAGTTCCTTCTTTACTTAATGTCTCAATTGATGCCACAAAATTGGGAACAGGTGAAACAATAGCTATTGGTGCAGGAGTTGAAAATATTGTTCCACTTGATCTTTTTGCCATTATATTTGGGAGAACATTGAAAGGGTCTATTTTTGGAGGACTAAAAGCCATTTCAGATCTTTCCATTGTAGCAGATAAATGTCAGAAAGAGGAACTCCCTCTTCATGAGCTGCTCACCCATGAGGTGCCACTGTCGGATATAAACAAAGCATTTGAGCTATTGAAGCAACCTAATTGTGTTAAAGTTGTCATCAAGATGTGA 1125 0.3938 MSSTPQVITCKAAICWEVGKPAIVEEIQVDPPKATEVRVKMLCASLCHTDISSLQGVPHNKFPLALGHEGVGVVESVGDEVKNLKEGDLIIPTYVGECKKCENCVSGKTNLCLTYPVRLTGLMPDNTSRLSIKGQRLYHVLSCATWSEYVVVDVNYLLKVDPTINLAYASFISCGFATGYGAAWKEARVKSGSTVVVFGLGAVGLGAISGAKMMGASKIIGVDKNEMKREKGEIFGLTHFINPSDSDKSASELVKEVNGGIGVDYSFECTGVPSLLNVSIDATKLGTGETIAIGAGVENIVPLDLFAIIFGRTLKGSIFGGLKAISDLSIVADKCQKEELPLHELLTHEVPLSDINKAFELLKQPNCVKVVIKM 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02300 374 Gene3D - 179 317 - -
Vivi2g02300 374 CDD liver_alcohol_DH_like 8 373 - -
Vivi2g02300 374 PANTHER ALCOHOL DEHYDROGENASE 6 366 - -
Vivi2g02300 374 SUPERFAMILY GroES-like 326 372 IPR011032 -
Vivi2g02300 374 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 317 - -
Vivi2g02300 374 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
Vivi2g02300 374 Pfam Zinc-binding dehydrogenase 202 321 IPR013149 -
Vivi2g02300 374 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 335 IPR036291 -
Vivi2g02300 374 SUPERFAMILY GroES-like 4 190 IPR011032 -
Vivi2g02300 374 Gene3D - 14 369 - -
Vivi2g02300 374 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Vivi2g02300 374 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02300 Vivi-Chr2 106363513 106365384 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02300 35 366 Monolignol Biosynthesis Gene Families AT2G21730 25.882 6.62e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02300 K00121 - gmx:100798341 599.742