Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02276 ATGGATCGGAGCTCTTTTTCCCCGCGAACCAGGAATACCCGACCGAAGCCCGATATTTACTCTACTTTCGTAGTTCACGACGACGCCGATGACGACGGCGAAACTAACCGGCGCCGGAAACCCGCCAACGCGGAAGTACAGGAAGATCCATACTCAACAATGGTGTTCAAAGACAACGGCCACAATGACGAAGACGACGAAGATTCCTTTCTCCCTCCGCTTCTCAAGCGTCTCCCCAAGGACTTCGGTGGCGGAGCGTCGATGGACTACGATGATGACGACGAATCTGGTGATTTCGGTACTGTGATTGTGAAGAGCGATCGGAGCCGGCAGAGAGATCGGTCATCTACCGGCGTGGCCTTACCGGTGGCCCCGGCTTGGAAGATTGGGAGTTCTTCTCAGGCGAATCCTTTGAACAGAAGGGACGAAGACGACGATGAAGATGACGACGGTGGCGGGTTTTCAACTTTTGTTATGCGTTCGACGGTGAAGGCTGGCGAGACAGAGTCTGGAAGTGGAACAATGGTGCGGCGGACAGGCAGCAACGAAGGCGGAGGTTCCACGATGGAGAGGGCGATTGCGAGTATGCAAGGTGTGGGAGAGTTTGGGAAGCAGAGGAAAGGAAGCGGATCTTCACATAACGAAGAGGGAAAACAACACTCCATCGCCACCAAGGTATCCACGAGTTCCATCCCTGATTGTGTTATCAGAGAGGACCCTACAACCAAGTATGAGTTACTCAATGAGCTTGGGAAGGGTTCCTATGGTGCTGTTTACAAAGCCAGGGATTATAGAACCTCTGAGATGGTTGCCATCAAAGTCATATCATTATCTGAAGGGGAGGAGGGATATGAGGAAATTCGTGGTGAGATTGAGATGTTACAACAGTGTAATCATCCTAATGTTGTCCGATATCTCGGAAGCTATCAAGGAGAAGAGTATCTTTGGATAGTGATGGAATACTGTGGTGGTGGTAGTGTTGCTGATCTGATGAATGTGACTGATGAAGCACTGGATGAGAGTCAAATCGCATATATCTGCAGAGAAGCACTGAAGGGACTTGACTATTTACACTCAATTTTTAAAGTTCATAGAGACATTAAAGGTGGGAATATCTTATTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGCGTTGCTGCACAACTTACGAGAACTATGTCAAAGCGCAATACGTTCATTGGAACTCCTCATTGGATGGCTCCGGAAGTCATTCAGGAAAGTCGCTATGATGGAAAGGTGGATGTCTGGGCTCTTGGCGTGTCTGCAATTGAAATGGCAGAGGGTGTTCCTCCAAGATCATCAGTGCATCCAATGAGGGTTTTATTCATGATATCCATCGAACCAGCTCCAATGCTCGAGGATAAAGAAAAATGGTCTTTATATTTCCATGATTTTGTTGCAAAGTGCCTGACCAAAGAACCTCGTCTCCGCCCTGCTGCATCTGAGATGTTGAAGCACAAATTTTTTGAAAAATGGAAAATTGGATCTGCTGTAATGTATACAAAACTAGAAAAGGCAAGGCAAGTCAGGGCTTCAATGGCTTTACAGGCGCAATCTCTCGCTCCTGCTGCAGCAGGAGAGCAGGAGCCAATGATAGCTTCCATACTAAATGACGAATATGGAGATACTCTTCCATCCAGACCACAGAGCATAAGCGTTGAGGAAGGAGCTTATATTTCATCACCTGGAACTATGAGGAAGTTGGAAAAGGTGGATGAGGATGACAATACTGAAGGTAACTTTGGCACTGTGATAGTCCATGGGAATGAATTATCTAAGACCAGACAGGATGCAGATTCTGCTAGTTATAAATCTGCTTTCGCCAGCAACACAGGAGGCACATTTTCTGACCTTCGGGTTGAGAGTCTAAAAGTTGGCGACATAAACACTGCCTCTTTTAGAGGATCTGGTCCTACTACAGATACCATACAATCGTCCTTACCATCTGTTGGTAATTCAAATGAGCAGAACCTCAAAATAAAAGGCACTCATCGAGCACAAGCTGGAGTTGGTAGTGATATTAGGAATAATACACTTCAGAATGAAACAGTCAGCCGCAAATTTGCTTTACAAGATAAGCTTTGGTCCATTTACGCCGCCGGTAATACAGTGCCCATACCCTTCTTAAGGGCGACAGATATATCACCTATTGCTCTCCTTTCAGACAATGTGCTTGGCGGCATGCAACAGGATGCAGGTGGAACTAAAACAGTAGAAGCATTGCAAGAACTTTTTAGTGGCGATGGACAGTCCAAAAAGGGTCGTAGAGGAATAAACGAGCATATGCCACTTCCTCCAAGCATTTGCCAAAGGTTGACGTCAAGTTCTACTCTAATGAATCTGGCACAAGCTTTAGCTTATCATAAGATGTGTTACGAAGACATGCCACTACAGGAATTACAAGCAATGCAGGAGCAGCGAACTATTCAAAATCTCTCCGACACACTTAGAACCATTCTTCGGTTATAG 2496 0.4619 MDRSSFSPRTRNTRPKPDIYSTFVVHDDADDDGETNRRRKPANAEVQEDPYSTMVFKDNGHNDEDDEDSFLPPLLKRLPKDFGGGASMDYDDDDESGDFGTVIVKSDRSRQRDRSSTGVALPVAPAWKIGSSSQANPLNRRDEDDDEDDDGGGFSTFVMRSTVKAGETESGSGTMVRRTGSNEGGGSTMERAIASMQGVGEFGKQRKGSGSSHNEEGKQHSIATKVSTSSIPDCVIREDPTTKYELLNELGKGSYGAVYKARDYRTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTDEALDESQIAYICREALKGLDYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGVPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPAASEMLKHKFFEKWKIGSAVMYTKLEKARQVRASMALQAQSLAPAAAGEQEPMIASILNDEYGDTLPSRPQSISVEEGAYISSPGTMRKLEKVDEDDNTEGNFGTVIVHGNELSKTRQDADSASYKSAFASNTGGTFSDLRVESLKVGDINTASFRGSGPTTDTIQSSLPSVGNSNEQNLKIKGTHRAQAGVGSDIRNNTLQNETVSRKFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGMQQDAGGTKTVEALQELFSGDGQSKKGRRGINEHMPLPPSICQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQAMQEQRTIQNLSDTLRTILRL 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02276 831 MobiDBLite consensus disorder prediction 98 114 - -
Vivi2g02276 831 MobiDBLite consensus disorder prediction 161 188 - -
Vivi2g02276 831 SMART serkin_6 244 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02276 831 ProSitePatterns Protein kinases ATP-binding region signature. 250 273 IPR017441 GO:0005524
Vivi2g02276 831 SUPERFAMILY Protein kinase-like (PK-like) 241 499 IPR011009 -
Vivi2g02276 831 MobiDBLite consensus disorder prediction 21 45 - -
Vivi2g02276 831 FunFam serine/threonine-protein kinase dst1 isoform X1 241 532 - -
Vivi2g02276 831 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 226 556 - -
Vivi2g02276 831 MobiDBLite consensus disorder prediction 201 225 - -
Vivi2g02276 831 CDD STKc_MAP4K3_like 243 498 - -
Vivi2g02276 831 MobiDBLite consensus disorder prediction 58 74 - -
Vivi2g02276 831 Gene3D Transferase(Phosphotransferase) domain 1 240 532 - -
Vivi2g02276 831 ProSiteProfiles Protein kinase domain profile. 244 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02276 831 Pfam Protein kinase domain 244 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g02276 831 FunFam Aurora kinase A 237 325 - -
Vivi2g02276 831 MobiDBLite consensus disorder prediction 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02276 Vivi-Chr2 105731810 105746186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02276 7 831 MAP Kinase Kinase Kinase Kinase AT1G69220 59.246 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Vivi2g02276 Pkinase 1.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02276 - - gmx:100804995 1259.97