Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02275 ATGACAGAAATTCATATTAGAAACAGTAAGCACAAGAAGATCTTGCCGAGATTGATGAAGAAACTACAAAGTGATTTAATCACTTTCTTTCCATTTAATCACCATCAAGGAGATTATAGTATTCCAGGGACATCAACAAGTAAAATATTTACAACAGTTAATGTTGTTACTAACTTTGATTTTCCCAAGAACTCATACACTTATTTGCACAGGGTTGGTCGTTCAGGAAGATTTGGCCACCTTGGTTTAGTGGTGAACTTGATCACTTACGAGGACTGCTTTAATTTATTTAGGATTGAACAAGAAATTGGCACTAAAATAAATGAAATTCCGCCACACATTGATCAAGAATTTTATGATCGGAACATGTAA 372 0.3387 MTEIHIRNSKHKKILPRLMKKLQSDLITFFPFNHHQGDYSIPGTSTSKIFTTVNVVTNFDFPKNSYTYLHRVGRSGRFGHLGLVVNLITYEDCFNLFRIEQEIGTKINEIPPHIDQEFYDRNM 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02275 123 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 50 119 - -
Vivi2g02275 123 Gene3D - 47 123 IPR027417 -
Vivi2g02275 123 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 118 IPR001650 -
Vivi2g02275 123 Pfam Helicase conserved C-terminal domain 50 79 IPR001650 -
Vivi2g02275 123 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 116 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02275 Vivi-Chr2 105648458 105650286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02275 53 114 Eukaryotic Initiation Factors Gene Family AT3G19760 43.548 3.46e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02275 K12614 - vvo:131646561 258.84