Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02270 ATGGAAGAAATTGAAGGAATGAAAGTATTAAAATCACATTTGGGACTGACTTCAAACAGTTCTAGTGCAAATCCTACTGCTGAGGAAGTGGAGAATAATGATTTGTCTGATAAAAGTGTGAGCAACGAAATTGAAGAGGATTTAGAAGATGAATTATTTGGAGTTGACTTCAATGTTGATTTTGTTGTTAACGGCGTGGAAAACATTTGGAAAATCAATTTAAAAAATATGAGCATTAAAAATGCGATGAAATATCATTTTCCAAATGTGGAGGTGGCATTTATGTTTTACAATTGGTATACTGGTTTACGTGGTTTTGCAGCAAGAAAAAGCAAGATATTGAGGAATAAAAATGGTGAAGCAACACAACAAACATTTTTGTGTTATAGACAAGGTTACATGGAAGAAAAAGTTGGAAGCAGTAGTCAAAAGCGAGAACCCAAGGCTCAGACGAGATGTGGTTGTGAAGCGAATTGTCGAGTTCATATTGAAATAACTATTGGAAGGTGGTACATTAAGTATTTGAATGATTGTCACAATCATACTTTGGTTGATAAAAAATACTTGGGGATGTTACCAGCTCACAGAAAGATAACAGATTATGACAAATTTCAGATGGATAATATGAGAAAGGTTGGCATTAGGACTACACACGTGTTTGGGTTGTTTGCTCATCAAGCTGGTGGATATGATAAGGTTGGATTCCGCCAACGTGACATGTACAATGAAGTCGCTAAAGATAAGAGAAGTGATTTGTCAGATGCAGGAGCTGCACTTGAGTTTCTTGCAACCATGTCTTGTAGTGATGAAATGATATTTTGGAGACATAGTATTGACGAGAATGGTAGATTGCAGCATCTATTTTGGTGTGATGGTGTGTGTCGTAAGGACTATGAAGTATTTGGCGATGTACTTGCATTTGATGTAACATATAGAAAGAACATGTACTTGTGTCCACTAGTGGTGTTTTCTGGAGTAAACCACCACAATCAAAGTATTGTGTTTGTAAGTGCCATAGTTGGAAATGAAAAAGAAGAAACATATGTGTGGCTATTGGAAATGTTAGTTGAAGCAATGGGAGGTAAAACTCCGAAGTCGGTTATAACTGATGGAGATAAGGCTATGAGAAATGCTATTAAAAGAGTTCTTCCAAATTCCCACCATAGGTTATGTGCATGGCACCTATTACGCAATGCGGCTACTAACATTAGCAATACTCGGTTTATTCCTAAGTTCAAATAG 1242 0.3647 MEEIEGMKVLKSHLGLTSNSSSANPTAEEVENNDLSDKSVSNEIEEDLEDELFGVDFNVDFVVNGVENIWKINLKNMSIKNAMKYHFPNVEVAFMFYNWYTGLRGFAARKSKILRNKNGEATQQTFLCYRQGYMEEKVGSSSQKREPKAQTRCGCEANCRVHIEITIGRWYIKYLNDCHNHTLVDKKYLGMLPAHRKITDYDKFQMDNMRKVGIRTTHVFGLFAHQAGGYDKVGFRQRDMYNEVAKDKRSDLSDAGAALEFLATMSCSDEMIFWRHSIDENGRLQHLFWCDGVCRKDYEVFGDVLAFDVTYRKNMYLCPLVVFSGVNHHNQSIVFVSAIVGNEKEETYVWLLEMLVEAMGGKTPKSVITDGDKAMRNAIKRVLPNSHHRLCAWHLLRNAATNISNTRFIPKFK 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02270 413 MobiDBLite consensus disorder prediction 16 30 - -
Vivi2g02270 413 Pfam FAR1 DNA-binding domain 96 184 IPR004330 -
Vivi2g02270 413 PANTHER OS01G0519700 PROTEIN 77 405 - -
Vivi2g02270 413 Pfam MULE transposase domain 304 398 IPR018289 -
Vivi2g02270 413 MobiDBLite consensus disorder prediction 16 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02270 Vivi-Chr2 105422194 105423544 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi2g02270 MULE 7.7e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02270 - - vvo:131649730 842.802