Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02218 ATGTCTTATGTAACAAACCCAGTTCTCATATCACTTCAAAAACCTCAAATTTCTTCACTTTTTTCGTCACCCAAAAGAGTTTCAACTTCAACCAGATATGTCTTGTTCAAGTCTCCAACACTTCACTTTGAGGCTAAAGATTCAAGCTTGGTGTTTTCTCCATTGGTGAAGGCCTTGGGAGTAAGACAAAGAAGGTTTCCAGTTGTTGTTGCAGCCTTAGCAGCAGATGCTGATGACAGTGAAATTGAAATTTCAAATGGGTCAGTTATATCCTCAAAGAGTTTCGGTGAGAAATTTCCTGCATTGGTTACTGGTTTCTTTTTCTTTATGTGGTACTTCTTAAATGTGATTTTCAACATACTCAACAAGAAAGTCTACAATTATTTTCCATATCCATATTTTGTTTCTGTTGTACATCTCCTTGTTGGGGTGGTATATTGCCTTGTTTCTTGGGGTTTAGCTCTACCAAGACGCGCACCAATGAATAAGGAGCTTTTGTTACTATTGACTCCAGTTGCATTTTGTCATGCCCTTGGTCATGTTATGTCCAATGTATCATTTGCTGCTGTTGCTGTATCGTTTACACATACCATAAAAGCTCTGGAGCCATTTTTCAACGCTTCCGCTTCCCAATTTGTTTTAGGCCAAAATATTCCCTTGTCTCTGTGGCTATCTTTGGCCCCTGTTGTTTTTGGTGTATCAATGGCATCACTAACTGAACTGTCTTTCAATTGGACTGGTTTCATTAGCGCAATGATTTCAAATATAGCGTTTACATACAGAAGTCTATATTCTAAGAAAGCAATGACGGGAATGGACAGTACGAATGTGTACGCGTATATCTCAGTAATCGCGCTCGCCTTTTGTATCCCTCCGGCAATACTTATTGAGGGACCCCAACTCATGGAATTTGGATTTAGAAATGCTATAGCCAAAGTAGGATTGATCAAGTTTTTGTCTGATCTTTTCTGGATTGGAATGTTTTACCATCTTTACAATCAGCTTGCTACTAATACTTTGGAACGTGTTGCGCCATTGACCCATGCAGTTGGAAATGTGTTGAAGAGAGTTTTTGTCATTGGATTTTCAATAGTGGTGTTTGGCAACAAGATATCTACACAAACTGGCATTGGAACTGCGATTGCGATTGCAGGTGTTGCCATCTATTCTCTGATAAAAGCAAACCTGGAAGAACAAAAACGGAAAGCTGCTGCAGCCGCGGCTGCATCTTAA 1233 0.3958 MSYVTNPVLISLQKPQISSLFSSPKRVSTSTRYVLFKSPTLHFEAKDSSLVFSPLVKALGVRQRRFPVVVAALAADADDSEIEISNGSVISSKSFGEKFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVVHLLVGVVYCLVSWGLALPRRAPMNKELLLLLTPVAFCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNASASQFVLGQNIPLSLWLSLAPVVFGVSMASLTELSFNWTGFISAMISNIAFTYRSLYSKKAMTGMDSTNVYAYISVIALAFCIPPAILIEGPQLMEFGFRNAIAKVGLIKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKANLEEQKRKAAAAAAAS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02218 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 319 391 - -
Vivi2g02218 410 PANTHER SOLUTE CARRIER FAMILY 35 105 397 - -
Vivi2g02218 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 147 239 - -
Vivi2g02218 410 Pfam Triose-phosphate Transporter family 103 390 IPR004853 -
Vivi2g02218 410 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 102 400 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02218 Vivi-Chr2 102654693 102657594 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02218 60 401 Antiporters AT5G46110 75.731 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02218 K15283 - pvy:116132902 583.563