Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02141 ATGGACCGATTACCATGGAAGGAGGAAGAAGAAGCGGCGGTTGGCGGTGGAGAAAGTGGACCGCCGCAAAGACCGAATTTAACTCTGCCGCCACGTACGGACGGCCTTTTCAGCGGCGGTTTTAGCCCCGGTCCTATGACGTTGCTTTCTAATTTATTGACTGACGGTGATGACGGCAAGTCCTTCTCCCAGCTTCTCGCGGGTGCCATGGTGTCTCCGGTTGCGGCCACCTCCGGCGCGCTTGAATCATCTGACTTTTTTTCACATCATCAGGTGTCATTTGGATTGTCAAACCATTCAGCACAGGCACAAGTCTCATTTCAAGGTGGACAATCCAACACAAATATATATAACCAAGCTGAACATTCATTGTCTGTATCAACATCCACAGCTCACGCTCCTCTCGTCGAACAAAGGTTGCAGCCTTCTTCAGTGAATGTTGATAAGCCTGCTGATGATGGTTACAATTGGAGGAAGTACGGACAGAAACAGGTGAAAGGTAGTGAGTTTCCTCGAAGTTATTATAAGTGCACACATCCTAACTGTCCTGTGAAGAAAAAGGTCGAGCGGTCGCTTGAAGGTCATGTAACCGCGATTATTTATAAAGGAGAGCATAATCATCAACCTCCGAATCCTAACAAGCGCTCGAAAGATGCTAATGACAATTCAAATATGCAAGGGAATGGTGATTTGTCTTATCAAAGGGGGAAGACAAACTCAACGTCTATGATGGATCCAGAATCGAGTAACGCAACAGGTGAACATCTATATGGAACGAGCGATAGTGAGGAAGTAGGTGATCGTGAAACTGATGTGGGGGAGAAAAGAGTTGAGCCTGACTCCAAAAGGAGAAATACAGAAGCTGCCATCTCAGATCCAATAGTTTCTTCACATAGGACTGTCACGGAGCCTAGAATCATTGTGCAAACGACTAGTGAAGTTGATCTCTTGGACGATGGTTATAGATGGCGAAAATATGGACAGAAAGTTGTCAAAGGCAACCCTTATCCTAGGAGCTATTACAAATGTACAACAGCAGGTTGCAACGTTCGAAAGCATGTAGAGAGAGCTTCGACAGATCCTAAAGCAGTCATAACAACATACGAAGGAAAACATAATCATGATGTTCCAGCAGCTAAGACCAATAGCCATACTTTTGCCAACAAAAATGCTCCACAGTTAAAATCACAAAATACCATTTCTGAGCAGCCTAGTTTCGGCAACATTGGTAGCGTTGGCGGAAATGAGCAACAACCTGTTGCGCGTCTAAGGCTGAAAGAAGAGCGGATAACTTAA 1296 0.4529 MDRLPWKEEEEAAVGGGESGPPQRPNLTLPPRTDGLFSGGFSPGPMTLLSNLLTDGDDGKSFSQLLAGAMVSPVAATSGALESSDFFSHHQVSFGLSNHSAQAQVSFQGGQSNTNIYNQAEHSLSVSTSTAHAPLVEQRLQPSSVNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLEGHVTAIIYKGEHNHQPPNPNKRSKDANDNSNMQGNGDLSYQRGKTNSTSMMDPESSNATGEHLYGTSDSEEVGDRETDVGEKRVEPDSKRRNTEAAISDPIVSSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTFANKNAPQLKSQNTISEQPSFGNIGSVGGNEQQPVARLRLKEERIT 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02141 431 SUPERFAMILY WRKY DNA-binding domain 149 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g02141 431 ProSiteProfiles WRKY domain profile. 312 377 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g02141 431 FunFam WRKY transcription factor 140 211 - -
Vivi2g02141 431 Gene3D WRKY domain 140 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g02141 431 Gene3D WRKY domain 302 378 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g02141 431 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 92 399 IPR044810 GO:0003700
Vivi2g02141 431 MobiDBLite consensus disorder prediction 215 257 - -
Vivi2g02141 431 SUPERFAMILY WRKY DNA-binding domain 309 377 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g02141 431 MobiDBLite consensus disorder prediction 393 415 - -
Vivi2g02141 431 MobiDBLite consensus disorder prediction 138 162 - -
Vivi2g02141 431 MobiDBLite consensus disorder prediction 201 287 - -
Vivi2g02141 431 SMART WRKY_cls 317 376 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g02141 431 SMART WRKY_cls 151 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g02141 431 ProSiteProfiles WRKY domain profile. 152 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g02141 431 FunFam WRKY transcription factor 33 304 370 - -
Vivi2g02141 431 MobiDBLite consensus disorder prediction 393 431 - -
Vivi2g02141 431 MobiDBLite consensus disorder prediction 260 287 - -
Vivi2g02141 431 MobiDBLite consensus disorder prediction 1 40 - -
Vivi2g02141 431 Pfam WRKY DNA -binding domain 152 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g02141 431 Pfam WRKY DNA -binding domain 318 375 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02141 Vivi-Chr2 99928534 99930738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02141 7 431 WRKY Transcription Factor Family AT2G03340 48.315 2.82e-142 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi2g02141 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02141 - - gmx:100127369 598.971