Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02134 ATGGACCGATTACCATGGAAGGAGGAAGAAGAAGCGGCGGTTGGCGGTGGAGAAGGTGGACCGCCGCAAAGACCGAATTTAACTCTGCCGCCACGTACGGACGGCCTTTTCAGCGGCGGCTTTAGCCCCGGTCCTATGACTTTGCTCTCTAATTTATTGACCGACGGTGATGACGGCAAGTCCTTCTCTCAGCTTCTCGCCGGTGCCATGGTGTCTCCCGTTGCAGCCACCTCCGGCGCGCTTGAATCATCTGACTTTTTTTCACATCAGGTGTCATTTGGATTGTCAAACCATCCAGCACAGGCACAAGTCTCATTTCATGGAGGACAATCTGACACAAATATGTATAACCAACCTGAACATTCATTGTCTGTATCAACATCCACCGCTCATGCTCCCCTCGTCGAACAAAGGTTGCAGCCTTCTTCAGTAAATGTTGATAAGCCTGCTGATGACGGTTACAATTGGAGGAAGTACGGACAGAAACAGGTGAAAGGTAGTGAGTTTCCTAGAAGTTATTATAAGTGCACACATCCTAACTGTCCTGTGAAGAAAAAGGTGGAGCGGTCGCTTGAAGGTCATGTAACCGCGATTATTTATAAAGGAGAGCACAATCATCAACCTCCGAATCCTAACAAGCGATCAAAAGATGCTAATGACAATTCAAATATGCAAGGGAATGGTGATTCGTCTTATCAACGGACGAATACAAACTCAATGGCTACGATGGATCCAGAATCGAGTCACGCAACAGGTGAACATCTATATGGAATGAGCGATAGTGAGGAAGTAGGTGATCGTGAAACTGATGTGGGGGAGAAAAGAGTTGAGCCTGATTCCAAAAGGAGAAATACAGAAGCCGCCATCTCAGATCCAATAGTTTCTTCACATAGGACTGTCACGGAGCCTAGAATCATTGTGCAAACGACTAGTGAAGTTGATCTCTTAGACGATGGTTATAGATGGCGAAAATATGGACAGAAAGTTGTCAAAGGGAACCCTTATCCTAGGAGCTATTACAAATGCACAACAGCAGGTTGCAACGTTCGGAAGCATGTAGAGAGGGCTTCGACAGATCCTAAAGCAGTCATAACAACTTACGAAGGAAAACATAATCATGATGTTCCAGCAGCTAAGACCAATAGCCATACTTTTGCCAACAAAAATGCTTCACAGTTAAAATCACAAAATCCCATTTCTGAGCAGCCTAGTTTCGGTAACATTGGTAGCGTTGGCGGAAATGAGCAACAACCTGTTGCGCGTCTAAGGCTGAAAGAAGAGCGGATAACTTAA 1293 0.4563 MDRLPWKEEEEAAVGGGEGGPPQRPNLTLPPRTDGLFSGGFSPGPMTLLSNLLTDGDDGKSFSQLLAGAMVSPVAATSGALESSDFFSHQVSFGLSNHPAQAQVSFHGGQSDTNMYNQPEHSLSVSTSTAHAPLVEQRLQPSSVNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLEGHVTAIIYKGEHNHQPPNPNKRSKDANDNSNMQGNGDSSYQRTNTNSMATMDPESSHATGEHLYGMSDSEEVGDRETDVGEKRVEPDSKRRNTEAAISDPIVSSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTFANKNASQLKSQNPISEQPSFGNIGSVGGNEQQPVARLRLKEERIT 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02134 430 SUPERFAMILY WRKY DNA-binding domain 308 376 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g02134 430 MobiDBLite consensus disorder prediction 259 286 - -
Vivi2g02134 430 MobiDBLite consensus disorder prediction 1 32 - -
Vivi2g02134 430 MobiDBLite consensus disorder prediction 391 414 - -
Vivi2g02134 430 FunFam WRKY transcription factor 33 303 369 - -
Vivi2g02134 430 MobiDBLite consensus disorder prediction 214 246 - -
Vivi2g02134 430 FunFam WRKY transcription factor 139 210 - -
Vivi2g02134 430 Gene3D WRKY domain 301 377 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g02134 430 Gene3D WRKY domain 139 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g02134 430 MobiDBLite consensus disorder prediction 200 290 - -
Vivi2g02134 430 MobiDBLite consensus disorder prediction 391 430 - -
Vivi2g02134 430 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 98 397 IPR044810 GO:0003700
Vivi2g02134 430 SMART WRKY_cls 150 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g02134 430 SMART WRKY_cls 316 375 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g02134 430 ProSiteProfiles WRKY domain profile. 151 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g02134 430 ProSiteProfiles WRKY domain profile. 311 376 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g02134 430 SUPERFAMILY WRKY DNA-binding domain 148 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g02134 430 Pfam WRKY DNA -binding domain 317 374 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g02134 430 Pfam WRKY DNA -binding domain 151 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02134 Vivi-Chr2 99655551 99657959 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02134 7 66 WRKY Transcription Factor Family AT2G03340 56.250 7.02e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi2g02134 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02134 - - gmx:100127369 593.964