Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02116 ATGGAGAGCACAGGATTAAGCCAATGGTTAAAGTTAAACCTTGTTGTTGTGATGGTTTTGGTATTTATGAAGGCAGAAGCTGATTATGCACCAATCACTATTCTCCAGAACGCAGTTGCAAAAGGAGCAGTATGTTTGGATGGCAGTCCACCAGCTTACCATTTAGTCAGAGGATATGGAACAGGAATTAACAATTGGTTAGTTCATATAGAGGGAGGAGGATGGTGCAACGATGTCACTTCATGCCTTGCTCGAAAGACTACTCGTTTAGGTTCATCTAAAGAAATGAATACTAGTTTTCCATTTTCAGGAATCTTAGATGACAAGAAAGAGTTTAATCCAGATTTCTACAATTGGAATAGAATTAGGGTTAGATATTGTGATGGTTCATCTTTTACAGGCGATGTGGAAGAAGTCGATCCAAAAACTCAATTGCACTTTAGAGGAGCAAGAATTTTCAATGCTGTCGTGGAGGATTTACTTGCAAAAGGAATGAAGAATGCTCAAAATGCAATTTTCTCAGGATGTTCAGCCGGAGGATTAACTGCATTATTGCACTGTGATAAATTTCGAGCTCTTTTACCAAAAGAAGCTAAAGTGAAATGTCTTTCAGATGCTGGTTACTTCATACATGCAAAAGATTTATCCGGAGAACCGCACATTGAAGAGTTCTTCAATCAAACTGTTACATTACATGGATCTGTGAAGAATTTGCCTAAATCATGCACTTCAAAACTCAAACCAGAGCTGTGCTTTTTTCCTCAATACTTTGCATCAGAGATCACTACACCTATCTTCATTTTAAATTCTCCAATCGACTCATGGCAGATTAAGAACATTTTCGTTACGGGTAATGTTGATCCTAAAAGATACTGGCATAACTGCAGGGAAGATTTAAACCAATGCAATCCTGATCAACTAAATCGAGTGCAAGACTATAGGGCCGAATTCCTAAAAGCACTTTCAGTTGTAAGAAAATCTCCATCCAATGGAGAATTTATAGACTCTTGCTATCTCCACTGCCAAACTGAACTGCCGCAATTATGGCAGTGGAGTGATTCTCCATTGTTGGCCAATACAACCATTGCAAAGGCCGTGGCAGACTGGTTTCATGACAAAAATCCTTTCCATCAAATAGATTGTCCGTACCCTTGCAATCCAACTTGTCACAACCGCACTTCTGAACCTCCGAAAAGCAGTCCAATAGCATAG 1212 0.3927 MESTGLSQWLKLNLVVVMVLVFMKAEADYAPITILQNAVAKGAVCLDGSPPAYHLVRGYGTGINNWLVHIEGGGWCNDVTSCLARKTTRLGSSKEMNTSFPFSGILDDKKEFNPDFYNWNRIRVRYCDGSSFTGDVEEVDPKTQLHFRGARIFNAVVEDLLAKGMKNAQNAIFSGCSAGGLTALLHCDKFRALLPKEAKVKCLSDAGYFIHAKDLSGEPHIEEFFNQTVTLHGSVKNLPKSCTSKLKPELCFFPQYFASEITTPIFILNSPIDSWQIKNIFVTGNVDPKRYWHNCREDLNQCNPDQLNRVQDYRAEFLKALSVVRKSPSNGEFIDSCYLHCQTELPQLWQWSDSPLLANTTIAKAVADWFHDKNPFHQIDCPYPCNPTCHNRTSEPPKSSPIA 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02116 403 Pfam Pectinacetylesterase 24 374 IPR004963 GO:0016787
Vivi2g02116 403 PANTHER NOTUM-RELATED 16 391 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02116 Vivi-Chr2 98313289 98317717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02116 6 402 Carbohydrate Esterase AT4G19420 55.787 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02116 K19882 - gmx:100776478 593.964