Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02058 ATGTCTCAGATGATTAATGATTCAACAACCATAAAACTTTTTGGTACTACCATCTTTCTGACACACAACATCTATGTCTCTTCCAATGATTCTTCCTCAAAATTTCCCCATGAAGATTTCTCTGATCATAGTCTTCATTCATCTGTATCTTCATCTTCTACACTTGATGAGGTCTCACAACAAACCATAGAGGCTTCATTTCACCCCACAAAGGATTTAAAATCTCCCACATCTTCAAATCTTATTCAGAACCCCAAGACTTCCTCATCAGAAACAGAAACCTCTCAACTGAATTCCACTACAATTGATGAACAAAGTGATATATCACAAGACAAGGCTCCAAAGAAACCAGACATAATTGTTCCATGCCCAAGATGCAAAAGCATGGACACAAAGTTTTGCTACTACAACAACTACAACGTCAAGCAGCCCAGACACTTCTGCAAAAACTGCCAGAGATACTGGACTTCCGGTGGAACCGCGAGAAAGATGCTTGTCGGAGCAGGTCGCCGTAAGAATAAAGTCACTTCTAATTATCCTCAAATGAGTACTGTCTTGACCTTTGGATCAAATTCTTCTAATGTAACATACTATGGTGGTTTCTTGCAACCAATATGTAATGTACAATCTTGTGGCCCAAGTAAATCTACATTAGGGAAACATTCAAGAGATGGAGACATGATCAATCTTTCTAACTCTGAGAAAGAAAAGGTTGGATTAGAAAGCAACAACAAAGACAGTAATGATAGTAATGAAGTGTTGATTCCTAAGTTATTGAGATTTGATGACCCTAAAGATGTTGCAAAGAGTTCTATATGGTCAACAGTAGGAGTCAAGAATGGGAGAGGAGTTTTCAAGGGATTTGGATCTAACTGTGATAACAATAATCATGCGGTTGATGCATCTTCATCAGTGTTGAAAGCTAATCCTGCAGCTTTATCAAGGTCTATTGTGTACCACGAGAGAATTTGA 972 0.3827 MSQMINDSTTIKLFGTTIFLTHNIYVSSNDSSSKFPHEDFSDHSLHSSVSSSSTLDEVSQQTIEASFHPTKDLKSPTSSNLIQNPKTSSSETETSQLNSTTIDEQSDISQDKAPKKPDIIVPCPRCKSMDTKFCYYNNYNVKQPRHFCKNCQRYWTSGGTARKMLVGAGRRKNKVTSNYPQMSTVLTFGSNSSNVTYYGGFLQPICNVQSCGPSKSTLGKHSRDGDMINLSNSEKEKVGLESNNKDSNDSNEVLIPKLLRFDDPKDVAKSSIWSTVGVKNGRGVFKGFGSNCDNNNHAVDASSSVLKANPAALSRSIVYHERI 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02058 323 MobiDBLite consensus disorder prediction 31 116 - -
Vivi2g02058 323 ProSitePatterns Zinc finger Dof-type signature. 123 159 IPR003851 GO:0003677|GO:0006355
Vivi2g02058 323 MobiDBLite consensus disorder prediction 45 107 - -
Vivi2g02058 323 Pfam Dof domain, zinc finger 120 174 IPR003851 GO:0003677|GO:0006355
Vivi2g02058 323 ProSiteProfiles Zinc finger Dof-type profile. 121 175 IPR003851 GO:0003677|GO:0006355
Vivi2g02058 323 PANTHER CYCLIC DOF FACTOR 2 209 322 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02058 Vivi-Chr2 96628611 96629760 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02058 9 323 C2C2-Dof Transcription Factor Family AT1G69570 30.380 4.87e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi2g02058 zf-Dof 7.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02058 - K16222 vvo:131646459 597.43