Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02042 ATGGCGATAATTGAACTATACCCCAAATTCTTCTTCTCTCAAAACCCAATTCCCAAACCCTTCAAAAACCCTAATTTCAATCCCAGAAACACCGCATTCAACCCAATCGCTCAAATTTCCCACCAACCAATAACCACCACTCCAAACCGCGGCATAATCTTCCGAGAAAAAGTTCTATACCTCGAAAAACTCAAAGTAAATCCACAAAAAGCCTTCAAACAAAACCCCACCCTCCGAACTTGTCCTCTCCAAACCCTAAAATCTGTCGAACAATGCCTCTCATCAATCGGTATACACAGAACCGAAATGGGTCGAATCCTCGACATGCTTCCTGCACTTCTCACGTGCGAACCACACAACGACATTTACCCCCTTCTCGATTTCCTCCTCAACGAGGTTCAAATCCCTTACCACGATGTTCAAAAATCAATCTTGCGGTGTCCTAGGTTGTTGGTGAGTAGCGTAGAGAATCGATTGAGACCCGCGCTCTGGTTTTTGAGGGAATTAGGGTTTGTTGGGCCGCATTCTCTCACGTGCCAAACTACTTTGCTTTTGGTTTCTAGTGTGGAGAATACCCTTTTGCCTAAAGTTGAGTTTTTGATGGGTTTGGGGTTCACACGTGTGGAGGTTTCGAATATGATTGTTAGGTCTCCGGGTTTGTTGACTTTTAGTGTGGCGAATAATTTGGGTCCGAAAGTTGAGTTTTTCTTGAATGAGATGAATGGTGATGTTGCTGAGTTGAAGGGGTTTCCTCAGTTTTTCTCTTTTAGCTTGGAGAAGAGGATTAAGCCGAGGCACGCTGAGTTAGTTCGGCTTGGATTGGCGATTCCTCTGCAAGAGATGTTGCGGGTTAGTGATGGCGAGTTTGATTCCAGGTTGTTTGAGTTGCGGTTAAGGGAAATTGAGGGAAGAAGATAA 918 0.4455 MAIIELYPKFFFSQNPIPKPFKNPNFNPRNTAFNPIAQISHQPITTTPNRGIIFREKVLYLEKLKVNPQKAFKQNPTLRTCPLQTLKSVEQCLSSIGIHRTEMGRILDMLPALLTCEPHNDIYPLLDFLLNEVQIPYHDVQKSILRCPRLLVSSVENRLRPALWFLRELGFVGPHSLTCQTTLLLVSSVENTLLPKVEFLMGLGFTRVEVSNMIVRSPGLLTFSVANNLGPKVEFFLNEMNGDVAELKGFPQFFSFSLEKRIKPRHAELVRLGLAIPLQEMLRVSDGEFDSRLFELRLREIEGRR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02042 305 PANTHER CGI-12 PROTEIN-RELATED 69 295 IPR003690 GO:0003690|GO:0006355
Vivi2g02042 305 Gene3D Transcription termination factor 3, mitochondrial 56 302 IPR038538 -
Vivi2g02042 305 SMART mt_12 211 243 IPR003690 GO:0003690|GO:0006355
Vivi2g02042 305 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Vivi2g02042 305 SMART mt_12 69 99 IPR003690 GO:0003690|GO:0006355
Vivi2g02042 305 SMART mt_12 104 136 IPR003690 GO:0003690|GO:0006355
Vivi2g02042 305 SMART mt_12 141 172 IPR003690 GO:0003690|GO:0006355
Vivi2g02042 305 SMART mt_12 175 206 IPR003690 GO:0003690|GO:0006355
Vivi2g02042 305 Pfam mTERF 130 289 IPR003690 GO:0003690|GO:0006355
Vivi2g02042 305 Pfam mTERF 69 171 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02042 Vivi-Chr2 95760454 95761694 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi2g02042 mTERF 2.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02042 K15031 - gmx:100785219 375.17