Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02019 ATGTCTCAGATGATTAATGATTCACCAACCATAAAACTTTTTGGTACTACCATCTTTCTGACACACAACATCTATGTCTCTTCCAATGATTCTTCCTCAAAATTTGCTCATGAAGATTTCTCTGATCATACTCTTAATTCATCTGTATCTTCATCTTCTACACTTGATGAGGTCTCACAACAAACCATAGAGGCTTCATTTCACCCCACAAAGGATTTAAAATCTCCCACATCTTCAAATCTTATTCAGAACCCCAAGACTTCCTCATCAGAAACAGAAACCTCTCAACTGAATTCCACTACAATTGATGAACAAAGTGATATATCACAAGACAAGGCTCCAAAGAAACCATACATAATTGTTCCATGCCCAAGATGCAAAAGCATGGACACAAAGTTTTGCTACTACAACAACTACAACGTCAAACAACCCCGACACTTCTGCAAAAACTGCCAGAGATACTGGACTTCCGGTGGAACCGCGAGAAAGATGCTTGTAGGAGCAGGTCGCCGTAAGAACAAAGCCACTTCTAATTATCCTCAAATGAGTACTGTCTTGACCTTTGGATCAAATTCTTCTAATGTAACATACTATAGTGGTGTTTTGCAACCAATATGGAATGTACAATCTTGTGGCCCAAGTAAACCTACATTAGGGAAACATTCAAGAGATGGAGACATGATCAATCATCCCAACTCAGAGAAAGAAAAGCTTGGATTAGAAAGCAACAAAAAAGAAAGGAATGATAGTAATGAAGTGTTGATTCCTAAGTTACTGAGATTTGATGACCCTAAAGATGTTGCAAAGAGTTCTATATGGTCAACAGTAGGAGTCAAGAATGGGAGAGGAGTTTTCAAGGGATTTGGATCTAACTGTGATAACAATAATCATGCGGTTGATGCATCTTCATCAGTGTTGAAAGCTAATCCCGCAGCTTTATCAAGGTCTATTGTGTACCACGAGAGAATTTGA 972 0.3848 MSQMINDSPTIKLFGTTIFLTHNIYVSSNDSSSKFAHEDFSDHTLNSSVSSSSTLDEVSQQTIEASFHPTKDLKSPTSSNLIQNPKTSSSETETSQLNSTTIDEQSDISQDKAPKKPYIIVPCPRCKSMDTKFCYYNNYNVKQPRHFCKNCQRYWTSGGTARKMLVGAGRRKNKATSNYPQMSTVLTFGSNSSNVTYYSGVLQPIWNVQSCGPSKPTLGKHSRDGDMINHPNSEKEKLGLESNKKERNDSNEVLIPKLLRFDDPKDVAKSSIWSTVGVKNGRGVFKGFGSNCDNNNHAVDASSSVLKANPAALSRSIVYHERI 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02019 323 MobiDBLite consensus disorder prediction 216 247 - -
Vivi2g02019 323 ProSitePatterns Zinc finger Dof-type signature. 123 159 IPR003851 GO:0003677|GO:0006355
Vivi2g02019 323 ProSiteProfiles Zinc finger Dof-type profile. 121 175 IPR003851 GO:0003677|GO:0006355
Vivi2g02019 323 PANTHER CYCLIC DOF FACTOR 2 199 322 IPR045174 GO:0003700|GO:0006355
Vivi2g02019 323 MobiDBLite consensus disorder prediction 219 247 - -
Vivi2g02019 323 MobiDBLite consensus disorder prediction 67 113 - -
Vivi2g02019 323 MobiDBLite consensus disorder prediction 67 107 - -
Vivi2g02019 323 Pfam Dof domain, zinc finger 121 175 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02019 Vivi-Chr2 94699812 94700856 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02019 89 323 C2C2-Dof Transcription Factor Family AT5G62430 42.177 7.70e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi2g02019 zf-Dof 1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02019 - K16222 vvo:131646459 639.032