Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01955 ATGGCAAAAAAACATGAAGGATGTGCTGTGGGAATAGACCTTGGAACAACGTATTCATGTGTTGCTGTCTGGTTGGATGAACACAATAGAGTTGAGATTATCCACAATGACCAAGGCAACAGAATCACACCTTCTTTTGTTTCTTTCAACAACGATCAAAGGTTGATTGGTGATGCAGCTAAGAATCAGTCTGCTACCAACCCTGAAAACACAGTATTTGATGCTAAGAGGTTAATTGGTAGGAAATTTAGTGATCCAGTTGTTCAAAAAGATAAAATGTTGTGGCCGTTCAAAGTCATTGCCGGTGTCAATGACAAACCAATGATCACCCTTCAGTATAAGGGTCAAAAGAAGCTATTTTGTGCTGAAGAAATATCATCTATGGTCCTTACAAAGATGAGAGAGATCGCAGAGGTATATCTGGAGTCTTCTGTCAAAAATGCTGTTGTTACTGTGCCAGCTTACTTCAGTGATTCACAGCGAAAAGCCACCATAGATGCTGGTGCCATTGCTGGTCTTAATGTCATCAAGATAATCAATGAACCTACTGCTGCGGCTATTGCGTATGGCCTTGACAAGAGAAGTGATTGCGATGGTAAACGGAATATTTTTGTCTTTGATCTTGGCGGTGGTACTTTTGATGTATCTATCCTCACAATTAAGGGTGATGTCTTTGAAGTAAAGGCCACTGCTGGAAACACACACCTAGGGGGAGAGGACTTTGATAGCAGAATGGTGAACTATTTTGTAGAGGAGTTCAAAAAGAAGAATGAAGTGGATATTAGTGGTAACCCAAGAGCGTTAAGGAGGTTGAGAACTGTGTGCGAAAGGGCAAAAAGGATTCTCTCTTTCGCTTATTTTACCATAGTTGAGGTAGATTCTTTATTTCATGGAATTGACTTCTCTTCGTCAATTACTCGTGCCAAATTTGAGGAAATTAATATGGATCTCTTTGAAGAGTGTATGGCAACTGTTGAGAGTTGTCTTTGTTATTCAAAGATGTGCAAGAGTGATATTGATGATGTTGTTCTTGTGGGTGGCTCCTCTAGGATTCCCAAATTGCAGGATTTATTGCGAGACTTCTTCAAGGGGAAGGAATTGTATAGAAGTATCAACCCAGATGAAGCTGTTGCCTATGGTGCAGCTGTTCAAGCTGCTGTTTTGAGTAAAGGCTTTAAGAATGTCCCAAATTTGGTGCTGCAGGATGTTACCCCATTATCACTTGGTATCTTAGTAAATGATGATGATGATGATGATAACATGGATGTGGTGATTCCTAGGAACACTTCTGTACCGATCAAGAAGACAAAAGAATATTACACCGCTGAAGATAATTGCAATGTCTCAATTAAGGTTTATGAGGGTGAGAGAGCAAGAGCCACAGACAACAATCTGCTTGGTTTCTTCTGCCTTTCTTGCCCTGGTACTCCTTGTTATCAGCCTTTGGAGGTATGCTTTGCCATTGATGATAATGGTATCTTAACTGTTTCTGCCAAGGAAATGTCTACAGGCAATACGAACGAGATCACTATAACCAGTGATAAAGGAAGGTTGTCAGCATTTGAAATTCGTAAAATGATTGAAGAAGCTGAGAGATACCATGTGGAAGATAAGAACTTTTTAAGGATAGCCAAAGTAATGAATAAATTTGATGATGCTGTTTACAGTATGAAGAATGCATTAAAGAGAAAGGATGTTAATCTAAAGCTCTCTCCTCAAGAAAGTGAGAAGATCAACAAAGCAATTACTGTGGCCACAAAGTTGCTTGCTAAGGATAGCCAACAGAAAGAAATAGATGTTTTGGAGGGTCATCAGAAGGAGCTGGAGTGCATGTTGGAACACCTTATACCAAAGAGTGACTAG 1863 0.3983 MAKKHEGCAVGIDLGTTYSCVAVWLDEHNRVEIIHNDQGNRITPSFVSFNNDQRLIGDAAKNQSATNPENTVFDAKRLIGRKFSDPVVQKDKMLWPFKVIAGVNDKPMITLQYKGQKKLFCAEEISSMVLTKMREIAEVYLESSVKNAVVTVPAYFSDSQRKATIDAGAIAGLNVIKIINEPTAAAIAYGLDKRSDCDGKRNIFVFDLGGGTFDVSILTIKGDVFEVKATAGNTHLGGEDFDSRMVNYFVEEFKKKNEVDISGNPRALRRLRTVCERAKRILSFAYFTIVEVDSLFHGIDFSSSITRAKFEEINMDLFEECMATVESCLCYSKMCKSDIDDVVLVGGSSRIPKLQDLLRDFFKGKELYRSINPDEAVAYGAAVQAAVLSKGFKNVPNLVLQDVTPLSLGILVNDDDDDDNMDVVIPRNTSVPIKKTKEYYTAEDNCNVSIKVYEGERARATDNNLLGFFCLSCPGTPCYQPLEVCFAIDDNGILTVSAKEMSTGNTNEITITSDKGRLSAFEIRKMIEEAERYHVEDKNFLRIAKVMNKFDDAVYSMKNALKRKDVNLKLSPQESEKINKAITVATKLLAKDSQQKEIDVLEGHQKELECMLEHLIPKSD 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01955 620 PANTHER HEAT SHOCK PROTEIN 70KDA 9 582 IPR013126 GO:0005524|GO:0140662
Vivi2g01955 620 FunFam Heat shock 70 kDa protein 73 128 - -
Vivi2g01955 620 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 520 614 IPR029048 -
Vivi2g01955 620 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 393 546 IPR029047 -
Vivi2g01955 620 Gene3D - 10 386 - -
Vivi2g01955 620 FunFam Heat shock 70 kDa 237 320 - -
Vivi2g01955 620 FunFam Heat shock protein 70 10 200 - -
Vivi2g01955 620 Gene3D Actin; Chain A, domain 4 237 320 - -
Vivi2g01955 620 Gene3D - 73 128 - -
Vivi2g01955 620 Pfam Hsp70 protein 9 614 IPR013126 GO:0005524|GO:0140662
Vivi2g01955 620 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Vivi2g01955 620 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vivi2g01955 620 Gene3D - 194 368 - -
Vivi2g01955 620 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 548 IPR029047 -
Vivi2g01955 620 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Vivi2g01955 620 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Vivi2g01955 620 SUPERFAMILY Actin-like ATPase domain 199 389 IPR043129 -
Vivi2g01955 620 Gene3D - 547 619 IPR029048 -
Vivi2g01955 620 PRINTS 70kDa heat shock protein signature 60 68 - -
Vivi2g01955 620 PRINTS 70kDa heat shock protein signature 38 50 - -
Vivi2g01955 620 PRINTS 70kDa heat shock protein signature 8 21 - -
Vivi2g01955 620 PRINTS 70kDa heat shock protein signature 397 416 - -
Vivi2g01955 620 PRINTS 70kDa heat shock protein signature 479 495 - -
Vivi2g01955 620 PRINTS 70kDa heat shock protein signature 148 168 - -
Vivi2g01955 620 PRINTS 70kDa heat shock protein signature 371 391 - -
Vivi2g01955 620 PRINTS 70kDa heat shock protein signature 211 221 - -
Vivi2g01955 620 PRINTS 70kDa heat shock protein signature 339 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01955 Vivi-Chr2 91959466 91961562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01955 1 618 Calmodulin-binding Proteins AT3G12580 61.736 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01955 K03283 - gmx:102667578 860.136