Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01920 ATGTGGAGCCTTGGATTCATTGCTTTGATTAGGGTTTCTATTTTGTTGGCTTTTGCGTCTCTCATTTCTTCTCTCGAGCCCCAACTCGGATCAACCCGCGTCGTCTTTCAGACAAATTATGGAGACATTGAATTTGGTTTCTATCCAACTGTTGCACCCAAAACTGTTGACCATATTTTCAAGCTTGTGAGACTTGGAGGCTATAACACCAATCACTTCTTTCGGGTGGATAAGGGATTTGTAGCCCAAGTAGCTGATGTTGCAAATGGAAGATCTGCTCCCATGAATGAGGAACAAAGACGTGTAGCTGAAAAGACTGTTGTTGGTGAATTTAGTGATGTCAAACATGTTCGCGGCATTCTTTCAATGGGAAGGCACGACGATCCAGATAGTGGTGGATCCTCTTTTTCAATGTTACTTGGAAATGCTCCTCATCTTGATGGGAAGTATGCAATATTTGGAAAAGTTACAAAAGGCGATGATACATTGGCAAAGTTTGAGCAACTACCTACGCGTACAGAGGGAATGTTTGTAATGCTTGGGGCAGAAATGGAGAGACTTATGGTTAAGGCAAAAATGAATTGA 585 0.4205 MWSLGFIALIRVSILLAFASLISSLEPQLGSTRVVFQTNYGDIEFGFYPTVAPKTVDHIFKLVRLGGYNTNHFFRVDKGFVAQVADVANGRSAPMNEEQRRVAEKTVVGEFSDVKHVRGILSMGRHDDPDSGGSSFSMLLGNAPHLDGKYAIFGKVTKGDDTLAKFEQLPTRTEGMFVMLGAEMERLMVKAKMN 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01920 194 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 13 181 IPR044233 -
Vivi2g01920 194 CDD cyclophilin 35 171 - -
Vivi2g01920 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Vivi2g01920 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Vivi2g01920 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 IPR002130 GO:0000413|GO:0003755
Vivi2g01920 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 85 IPR002130 GO:0000413|GO:0003755
Vivi2g01920 194 Gene3D - 22 186 IPR029000 -
Vivi2g01920 194 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 35 189 IPR002130 GO:0000413|GO:0003755
Vivi2g01920 194 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 173 IPR002130 GO:0000413|GO:0003755
Vivi2g01920 194 SUPERFAMILY Cyclophilin-like 31 176 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01920 Vivi-Chr2 89875419 89877256 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01920 34 170 U-box Gene Family AT5G67530 30.345 5.94e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01920 - - gmx:100819238 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01920 2 89875419 89877256 Vivi2g01920 2 89875419 89877256 ECH