Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01869 ATGGGGAAAGGAAAAAGTCCTGGGAAGTGGATCAAGAGCTTGTTCTCGGGGAAGAAATCGTCGTCGAAGTCGTCTAGTTCGTCGAAGAAGAATGATATTTTTAAATCTTTGAGTAACAAGGATAGTTTGGGGTCTTCTGAGTTAACTGTGTCTAATCCAATTCCAACTGTGGATTCTTTGCTAATATCTCCGCCGATAACTGGAACTAATGTTGTCAAAGGATTGTTTTCGGAAAAGGAAGTAGTTAATCAGTCATCATCACATGAGAGGGATATTGTGTCAAATGGAGAGGAAGTGGCTCAGGTGGCACCGTCTGTAACTAATTTTGCGTCTCAAGTTGATCTTGAGACAGTCACGATTACAGATGCAGCTATTAAACTTCAGGCTGCTTGTAGAGGCTATCAGGCTCGCGGGGAATTTCAAACACAAAAAGCTATCACACAGCTGCAAGCTCTTATTCGTGGTCACTTGGTTAGAAGACATGCTGTTTCTGCTTTGTATTGTGTGAAGAGAATTGTTAAATTCCAAGCATTGGCTCGTGGTTACAATGTTAGGCGTTCTGATATTGGGCTTGAAGTCCTGAAAATTCGTAAGGATACCCAATGTTCACAATCTATTGGTGCAGCTACATCCACAGAGGCAGAGAAGCTGCCCGATAATGTCTTTGTCCACAAGCTGCTGGCTTCATCGTCCCATGCTTTTCCTCTATCTCTCAGTAGCGATCTTGGAGAACCTTACTTGGCTGAAAACTGGCTTGACCGTTGGACTAGGTCACAGTTTTGGGCACCTCTTCCTAAATTGAAGAAGAAACTTGAGTCAGCATCTGTTGAAAAAAATATCAGTTCTGGAACAGTTGAAAAGGGACAAGGTAAAAGGAATACTCGGAAATCTCCTACTGTGAAAGCTAATGATGGTTCAAGTTCAGGTTCTAACAAGCAGAAACAAGGTCTAAAAAAGGATTCAAATCACTCATTGGTTTCAGCTCTGGAACACGAAAACCCAAAGAAAGAACTTGAGAAAAGCAGTCTAAAAAAATCTCGCATGCAGAATGTTTCAGAAAAATCGGAGATTGTTAGTGAGAAAAGAAAACACAGCTCTAGGACAATTTCAGATCATACTGTTACTGATGTTTTGGAGCAGGGGCCAAACTCCTCTTCTGAGAAAATGAAAGTGATAACAGTGCCAAAGTCTGAAGAGTCTTATCCTGAGAAAAGTCTTGGAAAGAAAGCATTAGAAGAGAATAATGATAAGCCAAAGAAGAGCATAAATGGAAGTGCCATAGACAAGAAAAGTCTTGGACAGAAAGCACCAGAAGATAGTAATGATAAGCCAAAAAAGAGCTTAAATGGTGATGCGAAAGAAGAGAAAGGTCTTGGAAAGAAAGCACTAGAAGATAACAATGATAAACCAAAAAAGAGCTTAAATGGTGGTGCGAAAGAAGAAAAAGGTCTTGGACATAAAGCACTAGAAGATAATAATGATGAGCCAAAAAAGAGCTTAGATAGTGGTGTGAAAGAAGAGAAAGGTCTTGGACAGAAAGCACTAGAAGAGAAAGGTGATAATGATCCTGCTGCTGTTTTACAGACTAGTGTGAAGAATGTAGGAGATGTTAAAATAGGAGTTAGCGAAGACCTAAATGGCGGTGACAAAATTATTAGCAACAATAACCAAAGAAGAGCTTCACTACCTGCTAATTTTAACGATCAAGAAAATGAGTTACATAACACTCCAAGACTGCCGAGTTATATGGCTCCTACTGAATCAGCAAAAGCTAGGCTAAGGGGACAAGGCTCCCCTAGATTTGCTACTGATTTTTTAGACAAAAACAGTTTAACCAGGAGGCATTCACTTTCATCCTCATTTAACAGCAAGTCCGGTTCATTTTCTCCGAGAGCAGAAAAGCTGGTAAGTTTGAGCAACAGAGGAGTTCCGAGGACGGATAAATCTCTGTCATCTTCAAGGGATGGAACTGATAAGTTGACTCAACCTCAATGGAGAAGGTGA 2004 0.4047 MGKGKSPGKWIKSLFSGKKSSSKSSSSSKKNDIFKSLSNKDSLGSSELTVSNPIPTVDSLLISPPITGTNVVKGLFSEKEVVNQSSSHERDIVSNGEEVAQVAPSVTNFASQVDLETVTITDAAIKLQAACRGYQARGEFQTQKAITQLQALIRGHLVRRHAVSALYCVKRIVKFQALARGYNVRRSDIGLEVLKIRKDTQCSQSIGAATSTEAEKLPDNVFVHKLLASSSHAFPLSLSSDLGEPYLAENWLDRWTRSQFWAPLPKLKKKLESASVEKNISSGTVEKGQGKRNTRKSPTVKANDGSSSGSNKQKQGLKKDSNHSLVSALEHENPKKELEKSSLKKSRMQNVSEKSEIVSEKRKHSSRTISDHTVTDVLEQGPNSSSEKMKVITVPKSEESYPEKSLGKKALEENNDKPKKSINGSAIDKKSLGQKAPEDSNDKPKKSLNGDAKEEKGLGKKALEDNNDKPKKSLNGGAKEEKGLGHKALEDNNDEPKKSLDSGVKEEKGLGQKALEEKGDNDPAAVLQTSVKNVGDVKIGVSEDLNGGDKIISNNNQRRASLPANFNDQENELHNTPRLPSYMAPTESAKARLRGQGSPRFATDFLDKNSLTRRHSLSSSFNSKSGSFSPRAEKLVSLSNRGVPRTDKSLSSSRDGTDKLTQPQWRR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01869 667 SMART iq_5 142 163 IPR000048 GO:0005515
Vivi2g01869 667 SMART iq_5 167 189 IPR000048 GO:0005515
Vivi2g01869 667 SMART iq_5 119 141 IPR000048 GO:0005515
Vivi2g01869 667 MobiDBLite consensus disorder prediction 316 370 - -
Vivi2g01869 667 MobiDBLite consensus disorder prediction 432 520 - -
Vivi2g01869 667 Pfam Protein of unknown function (DUF4005) 569 640 IPR025064 -
Vivi2g01869 667 MobiDBLite consensus disorder prediction 642 667 - -
Vivi2g01869 667 Pfam IQ calmodulin-binding motif 121 137 IPR000048 GO:0005515
Vivi2g01869 667 Pfam IQ calmodulin-binding motif 144 161 IPR000048 GO:0005515
Vivi2g01869 667 Pfam IQ calmodulin-binding motif 170 186 IPR000048 GO:0005515
Vivi2g01869 667 MobiDBLite consensus disorder prediction 540 667 - -
Vivi2g01869 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 186 IPR027417 -
Vivi2g01869 667 Gene3D - 119 166 - -
Vivi2g01869 667 MobiDBLite consensus disorder prediction 281 526 - -
Vivi2g01869 667 PANTHER IQ-DOMAIN 5-RELATED 1 623 - -
Vivi2g01869 667 MobiDBLite consensus disorder prediction 295 315 - -
Vivi2g01869 667 MobiDBLite consensus disorder prediction 612 634 - -
Vivi2g01869 667 MobiDBLite consensus disorder prediction 371 391 - -
Vivi2g01869 667 MobiDBLite consensus disorder prediction 1 33 - -
Vivi2g01869 667 MobiDBLite consensus disorder prediction 401 424 - -
Vivi2g01869 667 MobiDBLite consensus disorder prediction 548 576 - -
Vivi2g01869 667 ProSiteProfiles IQ motif profile. 142 171 IPR000048 GO:0005515
Vivi2g01869 667 MobiDBLite consensus disorder prediction 15 33 - -
Vivi2g01869 667 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01869 Vivi-Chr2 87065046 87069223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01869 4 667 IQD Protein Family AT1G14380 32.493 2.19e-68 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01869 - - vvo:131651618 1236.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01869 2 87065046 87069223 Vivi2g01869 2 87065046 87069223 ECH
Vivi2g01869 2 87065046 87069223 Vivi1g01995 1 42229394 42235850 ECH
Vivi2g01869 2 87065046 87069223 Vivi1g01995 1 42229394 42235850 PCT