Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g01868 | ATGAAGAATTTCTTGTTTTCTTTATACTTCTTGTTTCCATTCATCTTTACAATTATTCTCATGCTCCTCACTCCAATTCCATGTGCACAATTAACAACACCAGAAACCAAAGTTCTTCTTCAAATTCAAACACTTCTTGAATACCCTCAACTTCTTCACAAATGGAAGAATCTCACCAACTTCTGCAACCTCTCTCCATCACCTTCCTTCACCATCGTCTGCACAAAGAATCATGTAACAGAATTAACAATCATTGGAAACAAAACAAAGCCAGTTTCAGCAAGATTCTCCACTGATTCCTTTTTCACTGTTTTAACAAAGCTTTCAAACATGAAGGTTTTGTCATTGGTGTCACTTGGTTTGTGGGGTCCATTGCCTTCAAAAATCTCTAGGCTTAAGTCTCTTGAAGTTTTCAACATTACTTCAAATTTCATCTATGGAGAAATTCCAGTATCAGTTTCATCTTTGAAGAATCTCAAGAGTCTTGTCTTGGCTGATAACTTTTTCAATGGAAATGTGCCTAATCTCACAAGATTAGCCTCTCTTGAAGAGATTAATCTTAGAAACAACCGATTCGGCCCCGAGTTTCCTTCGTCTTTGTTCTCTCTTCCTTTGCTACATAGCCTAAACTTGGCTGCAAATCAATTAACTGGAACGATTTCGGCGAATATATCTTGTAGTCCTTCTTTGAGATTTCTTGATATCTCACACAATTTTCTACAAGGAAAACTGCCATGGTGCATTGATTCGATGTCGTTGAACCGAACAATGTTTTACTCTGGCAACTGTCTGTCAACAAGAAATCTCAGCGATCAACATCCGTCGTCGTATTGCAAGAAATCATCAGTGTTGAACGTTAAGCCGAGATTCGAGAGGCCGAATAAATCAAAGATGCGACTAGGAGGAGTTGTACTAATCGGTATTATCGGAGGTTTCGTAGGAGCTGCAGTGGTTTTGATTCTACTCTTTCTGTTCATTTTGAGAAAGTTCAATGCAGAAAAAGCTTCTGTCACTGCTTATTCAAGACCAAATATTCATGCAAGTAAAAGAAATGTTCCTCAGCTGGTGAGGATAGCTTCAAATGGATTACCACCTTATAGAATTTTCAGAATAAAAGAAATCGAAGATGCAACCGACAACTTCGACTCGTCGAATCTATTAGGAGAAGGATCACAAGGACAGCAATATAAAGGCAGACTCAAAGATGGTTCAATGGTGATGGTTAATCAGAAGAGTTTGAGCAAAATCATTGATCAGAATTTGAAGGTGTTACCTTATTTAAGGCATAGGCATTTGGTGAGTGTTATAGGTCACTGTGCTATTAACAATGAGGATCATCCCAAAATGAAAAGCACAATGTTCATAGTATTTGAACACATCTCAAACATGTCATTGAGGATTCATCTTACAGATAGCAGAAAAAATGAGATGCTTAAGTGGCAACAAAGAATGGCGATTATCATCGGCGTTGCAAAAGGAATCAAGTTCTTACACACTGGAGTAACTCCTGGCATATTTGGAAACAACATTAAGATTGAGAATATTATGTTGGACAATAATCTCAATCCAAAAGTTAGTGGATATAGCATTCCATTTTCATGCAAGAAAGGTTCTGAGAGAAAACTTAAACAAAAAAGTGCACACAATCATATTAGCAGCATCAATAGTGCAGAAAAGGAAGACATATATCAATTTGGATTGATTCTACTTGAACTTATCACTGGCAAAGTAGTTACATCTTCTATGGAAGTTGAGGTGCTGAAGTATGAGCTTGAGAGAGGTTTATGTGAAGTTGCATCACCGAACGCGTTAAGGAGTGCTATCGATCCTTTGCTCCATGGGACTTATGCACATGAATCATTGAAGACTGCAGTTCTGATCACCATCATCTGTCTCAGCAAGGTTCCCGGTGACCGGCCTTCTATAGAAGATATTCTCTGGAATCTGCAGTACTCCATGCAAGTTCAAGAAGGAAGGTCCAGTAAAGCCTCAACATGA | 1998 | 0.3824 | MKNFLFSLYFLFPFIFTIILMLLTPIPCAQLTTPETKVLLQIQTLLEYPQLLHKWKNLTNFCNLSPSPSFTIVCTKNHVTELTIIGNKTKPVSARFSTDSFFTVLTKLSNMKVLSLVSLGLWGPLPSKISRLKSLEVFNITSNFIYGEIPVSVSSLKNLKSLVLADNFFNGNVPNLTRLASLEEINLRNNRFGPEFPSSLFSLPLLHSLNLAANQLTGTISANISCSPSLRFLDISHNFLQGKLPWCIDSMSLNRTMFYSGNCLSTRNLSDQHPSSYCKKSSVLNVKPRFERPNKSKMRLGGVVLIGIIGGFVGAAVVLILLFLFILRKFNAEKASVTAYSRPNIHASKRNVPQLVRIASNGLPPYRIFRIKEIEDATDNFDSSNLLGEGSQGQQYKGRLKDGSMVMVNQKSLSKIIDQNLKVLPYLRHRHLVSVIGHCAINNEDHPKMKSTMFIVFEHISNMSLRIHLTDSRKNEMLKWQQRMAIIIGVAKGIKFLHTGVTPGIFGNNIKIENIMLDNNLNPKVSGYSIPFSCKKGSERKLKQKSAHNHISSINSAEKEDIYQFGLILLELITGKVVTSSMEVEVLKYELERGLCEVASPNALRSAIDPLLHGTYAHESLKTAVLITIICLSKVPGDRPSIEDILWNLQYSMQVQEGRSSKAST | 665 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g01868 | 665 | Pfam | Leucine Rich Repeat | 229 | 250 | IPR001611 | GO:0005515 | |
Vivi2g01868 | 665 | FunFam | Putative inactive leucine-rich repeat receptor-like protein kinase | 460 | 665 | - | - | |
Vivi2g01868 | 665 | Pfam | Protein kinase domain | 383 | 646 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi2g01868 | 665 | Gene3D | Phosphorylase Kinase; domain 1 | 357 | 449 | - | - | |
Vivi2g01868 | 665 | SUPERFAMILY | Protein kinase-like (PK-like) | 363 | 649 | IPR011009 | - | |
Vivi2g01868 | 665 | ProSiteProfiles | Protein kinase domain profile. | 381 | 651 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi2g01868 | 665 | FunFam | Probable LRR receptor-like serine/threonine-protein kinase At2g02780 | 32 | 201 | - | - | |
Vivi2g01868 | 665 | SUPERFAMILY | L domain-like | 37 | 266 | - | - | |
Vivi2g01868 | 665 | Gene3D | Ribonuclease Inhibitor | 32 | 291 | IPR032675 | - | |
Vivi2g01868 | 665 | Gene3D | Transferase(Phosphotransferase) domain 1 | 460 | 664 | - | - | |
Vivi2g01868 | 665 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 92 | 650 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g01868 | Vivi-Chr2 | 87022067 | 87024331 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g01868 | 48 | 658 | Miscellaneous Gene Families | AT3G03770 | 38.536 | 1.96e-154 | 464 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VI-1 | Vivi2g01868 | Pkinase | 1.4e-13 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g01868 | - | - | mtr:11414733 | 924.465 |