Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01847 ATGGGGTTGTTGGGTTCTGAGAATGGTAAAGTTGTGGAGGATTGGGATGTGTGTAAATCAAAGGAGAGTAAGAAGAAGAACAAGAAGAATAAAGAGAATGAGAGTATGGTTAAAGAGAAAAAAACTGGGTGTTGGGTTAGGTTGAGATTTTTTGGTAGCTGCATTTCTTCGAGATCCAAAGTTGATACCTCAGTCAGTGGCAGTGGTACCGGCACCGTCACCAGTACTCATTATGCTGAAAGTAAATCGACTAATGATACAAGTCGATGCCAACCTGCGGCTCCAGTAATCTCTTCCACAACAACTAGTAATGCAGAAAGCAATTCGTCCACTTCTAAACTTGAAGAGGAGCTTAAAATTGCTTCCAGGCTACGGAAATTCTCTTTCAATGAACTTAAGTCAGCAACAAGAAATTTCCGGCCCGAGAGTTTTCTTGGCGAAGGTGGGTTCGGTTGTGTTTTCAAGGGTTGGATTGAAGAAAACGGAACTGCTGCAGTGAAGCCTGGTACAGGGCTTACCGTCGCTGTGAAAACCCTTAACCATGACGGGCTTCAGGGTCATAAAGAATGGCTGGCTGAGGTAAATTTTCTTGGTGATTTAGTTCATCAGAACCTTGTTAAACTCGTTGGTTACTGTATTGAAGATAATCAAAGGTTGTTAGTGTATGAATTCATGCCTCGAGGAAGCCTGGAAAATCACTTATTTAGGAGATCTCTGCCTCTTCCATGGTCGATTAGGATGAAAATTGCGCTAGGAGCTGCACAGGGTCTTGCTTTTCTTCACGAAGAAGCTGAACGACCAGTGATATATAGGGATTTTAAAACTTCGAATATACTATTAGACGCGGACTACAATGCTAAGCTCTCGGACTTTGGTCTTGCCAAAGATGGTCCTGAAGGCGATAAAACCCATGTGTCTACTCGAGTTATGGGAACCTATGGTTACGCAGCACCAGAATATGTCATGACAGGTCATCTTACATCAAAAAGTGACGTGTACAGTTTCGGAGTCGTACTACTTGAGATGTTAACCGGCAGAAGATCTATGGACAAACACCGACCCAACGGTGAACACAACCTTGTCGAATGGGCTCGACCGCATCTAGGAGAACGAAGAAGGTTCTACCGCTTAATAGACCCTCGTCTCGAAGGTCACTTTTCTGTAAAAGGAGCTCAGAAAGCTGCGCAACTAGCCGCCCACTGCCTAAGCAGAGATCCAAAAGCGAGACCCCTAATGAGCGAAGTCGTGGAAGCTTTAAAGCCTCTTCCAAACCTTAAAGACATGGCAAGCTCATCATACTATTTCCAAACAATGCAAGCCGATCGGTTTGGAGCAAGTCCAAACACTAGAAGCGCACATGTACAAGGAGCATCGCTCGCTCGGAATGGACAACAGCGAAGGAGCCTTTCGATACCGAATGGTACTCATGTATCTCCTTATCATCACAAGTTTCCCCAACAATCACCTAAACCTAATGTCAAAGCATAG 1488 0.4442 MGLLGSENGKVVEDWDVCKSKESKKKNKKNKENESMVKEKKTGCWVRLRFFGSCISSRSKVDTSVSGSGTGTVTSTHYAESKSTNDTSRCQPAAPVISSTTTSNAESNSSTSKLEEELKIASRLRKFSFNELKSATRNFRPESFLGEGGFGCVFKGWIEENGTAAVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHQNLVKLVGYCIEDNQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAQGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSVKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFGASPNTRSAHVQGASLARNGQQRRSLSIPNGTHVSPYHHKFPQQSPKPNVKA 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01847 495 MobiDBLite consensus disorder prediction 445 475 - -
Vivi2g01847 495 MobiDBLite consensus disorder prediction 16 36 - -
Vivi2g01847 495 FunFam Serine/threonine-protein kinase BIK1 106 224 - -
Vivi2g01847 495 CDD STKc_IRAK 145 422 - -
Vivi2g01847 495 Gene3D Transferase(Phosphotransferase) domain 1 225 440 - -
Vivi2g01847 495 PANTHER OS01G0588500 PROTEIN-RELATED 85 422 - -
Vivi2g01847 495 MobiDBLite consensus disorder prediction 445 495 - -
Vivi2g01847 495 SUPERFAMILY Protein kinase-like (PK-like) 117 419 IPR011009 -
Vivi2g01847 495 Gene3D Phosphorylase Kinase; domain 1 113 224 - -
Vivi2g01847 495 MobiDBLite consensus disorder prediction 59 111 - -
Vivi2g01847 495 ProSitePatterns Protein kinases ATP-binding region signature. 145 177 IPR017441 GO:0005524
Vivi2g01847 495 FunFam Probable serine/threonine-protein kinase PBL8 225 440 - -
Vivi2g01847 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Vivi2g01847 495 MobiDBLite consensus disorder prediction 59 112 - -
Vivi2g01847 495 Pfam Protein tyrosine and serine/threonine kinase 144 419 IPR001245 GO:0004672|GO:0006468
Vivi2g01847 495 ProSiteProfiles Protein kinase domain profile. 139 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01847 Vivi-Chr2 85603573 85607501 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01847 86 419 Glycoside Hydrolase AT3G07070 54.006 1.28e-118 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vivi2g01847 PK_Tyr_Ser-Thr 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01847 - - gmx:100787151 847.81