Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01775 ATGTTCCCTCCTTGCACGTGCCCCTCTTTTTTCGCTCTCTTTCACTTTTCACTCTTTCTTTCCCCAACTTCAAAAACCTCTCTAGTCACTAGTAGCTGCAGTAGCTCTCGTTCTCATACTCACACCATCCCACTCACCTTCCTTCAGATCCCATCTAACTCCAAACCCAAAACACTTCTCATTAATGACTCTACAAAGTACAAACCACACTTTCAATCTTCTTCCATTACCATGTTTCCCTTAACCATTCTTCTCGTCTTGTTCTTTGTACACTTCCCCACCTCAACATTAACATGTTCTTCCAATATTAACCCAAACTCAACAAAAACACACCCTTGTCCACCGTTCTCCTCCACCCCACCTTTCCCATTCTCAACCTCACCAGGTTGTGGCCACCCTTCTTTTCAACTAAACTGCTCATCTCCTCACTCTTTCATTTCCATCAACAACCTCTCTTTCTCCCTCCTATCTTACAAATCCAACACTTCCTCAATCACCCTCTCCCCTCACAACCCTCAAAACAATAACACTTGCCCATCTCCATCCTCATCTTCAATCCCTAATAAACCCATCAACCTCTCAAACTCCCCATTCACTCTCTCAGATGAACTATGCTCACGCCTCTCTTTTCTCCAACCTTGCCCCCCTCCAACACTTCCCAATTGCACTCACTGCCCATGGCAATGCAAAATCATCAAAAACCCAACAGAAATCTTCACTGACTGCAGATCTATGCATCACTCTGTTTCAGATTCTGAACCCAGTTGCCAAAGCGATGTTCTTAGTTACCTCAACGAGATACTCACTCTCGGTATCGAACTTCAATGGGATGAAGCATTAACACAAGACTCTTACTTCACAAATTGCACAGAATGCATCAACAAAAAAGGCTTCTGCGGTTACAATTCCTCAGACCCGAGCAAACACTTCATCTGTTTCCATTCCATAGAAACTCTTTCCCCGCCGTGGATTCACAAAATGAAGCTTAACAAAATCGCTGTTTTCGCGGTTATCATCGCTTTCACTTCGTTGCTTCTTTTCATCACAGTTACAATTTCAATTCTCCGATCCAGAAGCTTAAACTCTCGAGCAAAACTTGAAGAAGATCCAACCACCGTCTTCCTCCACAACCACCACTCCGCGAATCTCTTCCCACCGGTTTTCACCTACGACGAACTAAACACCTCCACTAACAACTTCGATCCAAATCGAAAACTCGGCGACGGTGGATTTGGTTCGGTTTACCTCGGCAAACTCCGAGACGGAAAACTCGCCGCCGTGAAACACCTCCACCGTCAAAATCAAAATCACACTTCCGCGTTCTCATCAAAATCATTCTGCAACGAGATTATCATCCTCTCTTCAATCAACCATCCAAATCTCGTTAAACTTCACGGTTACTGTAACGATCCACGAGGCTTGATTCTCGTTTACGATTACGTTCCAAACGGAACCCTAGCAGAGCACATTCACGGTTCAAGGAGTAAACGAAACGGTTACAAGCTGACGTGGCAAACGAGACTTGATATTGCTATACAAACGGCGTTAGCGATGGAGTATCTTCATTTTGCAGTTAAGCCACCGATAGTTCACAGAGATATAACATCGTCAAATATCTTCGTGGAAAAGGATATGAGGATTAAAGTCGGTGATTTCGGGTTATCGAGGTTGTTGATTCTGCAAGAAACGAGTCAAACGACGTCGTCTGGAGGGTACGTTTGGACCGGTCCTCAAGGTACACCGGGGTATTTAGATCCGGATTATCACCGGTCGTTCCGGTTGACGGAAAAGAGTGACGTGTACAGTTTTGGTGTTGTGTTGCTTGAACTGATTTCGGGGCTTAAAGCTGTGGATTATTGTAGGGATAAACGTGAGATGGCGCTTGCCGATATGGTTGTTTCGAGGATTCATACGGGTCAGTTGAGGGAAGTACTTGACCCGGTTCTTGATTTGGGGAATGACGGTGAGGCGCTGGACGCGGTGGCGGCTGTGGCGGAGTTGGCGTTCCGGTGTGTTGCGTCGGATAAAGATGATAGACCCGATTCGAGGGAGGTTGTTGGGGAGTTGAAACGAGTGAGGTTACGGAGGCTAGTGAATGATGACGTGGCAAAAGAGTGA 2118 0.4575 MFPPCTCPSFFALFHFSLFLSPTSKTSLVTSSCSSSRSHTHTIPLTFLQIPSNSKPKTLLINDSTKYKPHFQSSSITMFPLTILLVLFFVHFPTSTLTCSSNINPNSTKTHPCPPFSSTPPFPFSTSPGCGHPSFQLNCSSPHSFISINNLSFSLLSYKSNTSSITLSPHNPQNNNTCPSPSSSSIPNKPINLSNSPFTLSDELCSRLSFLQPCPPPTLPNCTHCPWQCKIIKNPTEIFTDCRSMHHSVSDSEPSCQSDVLSYLNEILTLGIELQWDEALTQDSYFTNCTECINKKGFCGYNSSDPSKHFICFHSIETLSPPWIHKMKLNKIAVFAVIIAFTSLLLFITVTISILRSRSLNSRAKLEEDPTTVFLHNHHSANLFPPVFTYDELNTSTNNFDPNRKLGDGGFGSVYLGKLRDGKLAAVKHLHRQNQNHTSAFSSKSFCNEIIILSSINHPNLVKLHGYCNDPRGLILVYDYVPNGTLAEHIHGSRSKRNGYKLTWQTRLDIAIQTALAMEYLHFAVKPPIVHRDITSSNIFVEKDMRIKVGDFGLSRLLILQETSQTTSSGGYVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDYCRDKREMALADMVVSRIHTGQLREVLDPVLDLGNDGEALDAVAAVAELAFRCVASDKDDRPDSREVVGELKRVRLRRLVNDDVAKE 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01775 705 ProSiteProfiles Protein kinase domain profile. 400 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g01775 705 Gene3D Transferase(Phosphotransferase) domain 1 481 702 - -
Vivi2g01775 705 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 85 695 IPR044652 GO:0004672
Vivi2g01775 705 Pfam Protein tyrosine and serine/threonine kinase 403 688 IPR001245 GO:0004672|GO:0006468
Vivi2g01775 705 MobiDBLite consensus disorder prediction 166 187 - -
Vivi2g01775 705 CDD STKc_IRAK 406 691 - -
Vivi2g01775 705 Pfam Wall-associated receptor kinase C-terminal 242 314 IPR032872 -
Vivi2g01775 705 SUPERFAMILY Protein kinase-like (PK-like) 380 689 IPR011009 -
Vivi2g01775 705 ProSitePatterns Protein kinases ATP-binding region signature. 406 428 IPR017441 GO:0005524
Vivi2g01775 705 ProSitePatterns Tyrosine protein kinases specific active-site signature. 529 541 IPR008266 GO:0004672|GO:0006468
Vivi2g01775 705 Gene3D Phosphorylase Kinase; domain 1 376 480 - -
Vivi2g01775 705 FunFam Putative serine/threonine-protein kinase At1g18390 family 376 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01775 Vivi-Chr2 81556000 81558460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01775 113 704 Receptor kinase-like Gene Family AT1G69910 60.099 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Vivi2g01775 PK_Tyr_Ser-Thr 7.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01775 - - vvo:131651591 1337.01