Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01758 ATGAAGAAGTTAGTGAAGGTTGAATTGTTCACACTCCCCAATAGACTCACACTGATTCAAATTTTCATGTTGTTGATGCTTTTCTACATGCTCTTCATGAGCTTTGAAATTCCCTTAGCATTCAAAGCAGGGGTTGGTTCAGAAAAAGTTGCTATTGGGTTTCTCACCGACTCAATGCCGCTTTTGGCAGAACAAAACCACCAGGAAATTCGACCCTTTGGGTTTCAATTTCAATCACAGAAAGTTTCAACTTTGAGCTTCAACAAGAGCTTTGATGGTGCATCAGAGCTTCACAAGGTGGCAAAACAGGCTTACATTTCGGGGAAGAAGTTATGGGAGGAAGTTGAGAGTGGTAAAGTTAAGAGCTTTTCGGGTTTTAAAATTGAAAACAGTTCGGATACTTGTTTGAATTCGGTTTCAATTTCTGGGTTTGAGTTTAGGGAGAAGCTGAAAGGGGTTATGGTTTTGCCTTGTGGGTTGACACTTTGGTCGCATGTGACTGTTGTGGGGACACCACGTTGGGCTCATGGGGAGATTGATTCGAAGATTGGGGTTGTGAAGGATGGTGATGAGCCTGTGATGGTTTCGCAGTTTATGATGGAGTTGCAGGGTTTGAAAGCTGTTGAGAATGAAGAGCCACCGAAGATATTGCATTTTAATCCTAGGCTTAAAGGGGATTGGAGTGGGAAGCCTGTGATTGAGCAGAATACTTGTTATAGGATGCAATGGGGTACTGCTCTTAGGTGTGAGGGATGGAAGTCTCGCGCAGATGAGGAAACTGTTGATGGACAGGTGAAATGTGAAAAATGGATTCACGATGATGAGAACCGATCGGAAGAGTGGAAGGCGACATGGTGGTTGAACAGACTAATGGGTCGGAAAAAAGACGTGCATGTGGATTGGCCATATCCTTTTGCTGAAGGGAAGTTATTTGTTCTCACCATAAGTGCTGGCTTGGAAGGTTACCATATTACTGTGGATGGGAGGCATGTGACGTCCTTTCCGTATCGCACTGGCTTTGCTCTTGAGGATGCTACCGGACTATCAATAAACGGGGACGTCGATGTGCACTCTATATATGCTGCTTCCTTACCTACATCGCATCCTAGCTTTGCTCCGCAGATGCATCTAGAATTGCTTCCTCAGTGGAAGGCTCCACCTATTCTTGGCGTGAATGTCGAGCTTTTCATTGGTATCCTTTCTGCTGGAAACCATTTTGCAGAACGTATGGCAGTGAGGAAGTCATGGATGCAACATAAGCTAATCAAATCCTCACATATTGTGGCTCGGTTTTTCGTAGCCTTGCATGCAAGGAAAGATATAAACGTGGAAATAAAGAAAGAAGCCGAGTATTTCGGCGATATTATTATAGTCCCATACATGGATCATTATGACCTTGTTGTTTTGAAGACCATAGCTATATGTGAATACGGGATTCGCACCGTGGCTGCCAAGTATATCATGAAGTGTGATGATGACACATTTGTTAGAGTGGATTCTATCGTAAGCGAGGCAAGAGAATTTGAAAGTGATGAAAGCTTTTATATGGGAAATATGAATTACCACCACAGGCCTCTTCGCGATGGGAAATGGGCCGTAACTTACGAGGAATGGATGGAGGAAGAATATCCTCCCTATGCTAACGGTCCGGGATACATCATCTCCTCTGACATTGCTCAGTTCATTGTATCCGAATTTGAACAGCAAAGATTAAAATTATTCAAAATGGAAGATGTGAGCATGGGAATGTGGGTAGAGAAATTCAACAGCACAAAAGAAGTAGAGTATGTGCACAGTTTCAAGTTCTGCCAATTCGGTTGCATTGAAGATTACTACACCGCGCATTACCAATCACCGAGACAAATGACGTGCATGTGGAATAAATTGCAACATCAAGGTAAACCACTTTGCTGCAACATGAGATGA 1926 0.4325 MKKLVKVELFTLPNRLTLIQIFMLLMLFYMLFMSFEIPLAFKAGVGSEKVAIGFLTDSMPLLAEQNHQEIRPFGFQFQSQKVSTLSFNKSFDGASELHKVAKQAYISGKKLWEEVESGKVKSFSGFKIENSSDTCLNSVSISGFEFREKLKGVMVLPCGLTLWSHVTVVGTPRWAHGEIDSKIGVVKDGDEPVMVSQFMMELQGLKAVENEEPPKILHFNPRLKGDWSGKPVIEQNTCYRMQWGTALRCEGWKSRADEETVDGQVKCEKWIHDDENRSEEWKATWWLNRLMGRKKDVHVDWPYPFAEGKLFVLTISAGLEGYHITVDGRHVTSFPYRTGFALEDATGLSINGDVDVHSIYAASLPTSHPSFAPQMHLELLPQWKAPPILGVNVELFIGILSAGNHFAERMAVRKSWMQHKLIKSSHIVARFFVALHARKDINVEIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGIRTVAAKYIMKCDDDTFVRVDSIVSEAREFESDESFYMGNMNYHHRPLRDGKWAVTYEEWMEEEYPPYANGPGYIISSDIAQFIVSEFEQQRLKLFKMEDVSMGMWVEKFNSTKEVEYVHSFKFCQFGCIEDYYTAHYQSPRQMTCMWNKLQHQGKPLCCNMR 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01758 641 FunFam Hydroxyproline O-galactosyltransferase 386 629 - -
Vivi2g01758 641 Pfam Galactoside-binding lectin 153 360 IPR001079 GO:0030246
Vivi2g01758 641 Gene3D - 144 360 - -
Vivi2g01758 641 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 152 362 IPR001079 GO:0030246
Vivi2g01758 641 CDD GLECT 156 359 IPR001079 GO:0030246
Vivi2g01758 641 SMART Gal_bind_lectin_2 156 361 IPR001079 GO:0030246
Vivi2g01758 641 Pfam Galactosyltransferase 408 588 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vivi2g01758 641 SUPERFAMILY Concanavalin A-like lectins/glucanases 154 360 IPR013320 -
Vivi2g01758 641 Gene3D - 391 634 - -
Vivi2g01758 641 FunFam Hydroxyproline O-galactosyltransferase GALT2 276 360 - -
Vivi2g01758 641 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 329 591 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vivi2g01758 641 FunFam Hydroxyproline O-galactosyltransferase GALT4 151 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01758 Vivi-Chr2 81152972 81157712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01758 1 641 Glycosyltransferase AT1G74800 59.199 0.0 830
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01758 2 81152972 81157712 Vivi2g01758 2 81152972 81157712 ECH
Vivi2g01758 2 81152972 81157712 Vivi1g00270 1 5459504 5470331 PCT