Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g01711 | ATGGCATTTGCAAACTACAAAATGAAGGGATCAAGTTCAAAAGCAGGACCAACAATTGATGACGCCAAGATTTATATCCAAGAAATAAAAGATGCATTTAAAGATGATAAGGATAAGTTCAACGAGTTTTCAAAGACTATGAAAGATATCAAAAATGGAAGGGGTGACTTAGTGTGTATGCTGGCAAGAGTAAAGGAATTGTTTGAAGGGCATAGAGAATTGTTATTGAAATTTAATGCCTATTTACCAAATGAATTTGCGATTACACCTCCACCAAGAAAGCCAAAAGTCAATCTAGAATATGCCAGGAAATATTTAATCAAGGTGAAGACTCGATTTCAAGATGATCAAGACGTTTACAAGTCGTTTCTAGCTATAATGAATATGTATAGAAAGAAAGAAAAAAGTGGTGAAGAGATTCAACGAATGGTTATTTCACTTTTTAAAGATCAACCTGATCTTATTGACGGGTTTAATGAGTTTCTTCCTTGA | 492 | 0.3354 | MAFANYKMKGSSSKAGPTIDDAKIYIQEIKDAFKDDKDKFNEFSKTMKDIKNGRGDLVCMLARVKELFEGHRELLLKFNAYLPNEFAITPPPRKPKVNLEYARKYLIKVKTRFQDDQDVYKSFLAIMNMYRKKEKSGEEIQRMVISLFKDQPDLIDGFNEFLP | 163 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g01711 | 163 | Pfam | Paired amphipathic helix repeat | 118 | 162 | IPR003822 | GO:0006355 | |
Vivi2g01711 | 163 | Pfam | Paired amphipathic helix repeat | 38 | 82 | IPR003822 | GO:0006355 | |
Vivi2g01711 | 163 | Gene3D | Paired amphipathic helix | 21 | 83 | IPR036600 | GO:0006355 | |
Vivi2g01711 | 163 | Gene3D | Paired amphipathic helix | 102 | 163 | IPR036600 | GO:0006355 | |
Vivi2g01711 | 163 | PANTHER | SIN3B-RELATED | 17 | 163 | IPR039774 | GO:0003714 | |
Vivi2g01711 | 163 | ProSiteProfiles | PAH domain profile. | 93 | 163 | IPR003822 | GO:0006355 | |
Vivi2g01711 | 163 | FunFam | Paired amphipathic helix protein Sin3 | 21 | 83 | - | - | |
Vivi2g01711 | 163 | ProSiteProfiles | PAH domain profile. | 15 | 85 | IPR003822 | GO:0006355 | |
Vivi2g01711 | 163 | FunFam | Paired amphipathic helix SIN3-like protein | 94 | 163 | - | - | |
Vivi2g01711 | 163 | SUPERFAMILY | PAH2 domain | 14 | 84 | IPR036600 | GO:0006355 | |
Vivi2g01711 | 163 | SUPERFAMILY | PAH2 domain | 91 | 163 | IPR036600 | GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g01711 | Vivi-Chr2 | 78971849 | 78972616 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g01711 | 8 | 134 | WRKY Transcription Factor Family | AT4G12020 | 31.496 | 2.06e-13 | 65.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Vivi2g01711 | PAH | 9.4e-07 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g01711 | K11644 | - | vvo:131646330 | 210.305 |