Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01703 ATGCAAGAAACAGGTGTTAAGAAGCCAACCGTGGATATAAAATATGCTGCGAAATTTGTGCGTAAGGTGGAGACTCGATTTCAACGTGTTCAGCAGTGTCATGTTTATCCATTGTTTCTGGACATCCTAAAATCATATACAGAAAACAAAAAAAGTCTTGATGATGTCATTATGGAGGTTAATTTTCTTTTCATAGGCCATGATGATCTGATTGACGACTTTACTAATTTTCTTCCTTGA 240 0.3583 MQETGVKKPTVDIKYAAKFVRKVETRFQRVQQCHVYPLFLDILKSYTENKKSLDDVIMEVNFLFIGHDDLIDDFTNFLP 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01703 79 SUPERFAMILY PAH2 domain 6 79 IPR036600 GO:0006355
Vivi2g01703 79 Gene3D Paired amphipathic helix 16 79 IPR036600 GO:0006355
Vivi2g01703 79 ProSiteProfiles PAH domain profile. 7 79 IPR003822 GO:0006355
Vivi2g01703 79 Pfam Paired amphipathic helix repeat 35 78 IPR003822 GO:0006355
Vivi2g01703 79 PANTHER SIN3B-RELATED 10 79 IPR039774 GO:0003714
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01703 Vivi-Chr2 78565805 78566333 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi2g01703 PAH 4.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01703 - K11644 vvo:131649417 163.696