Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01692 ATGGTTCTTGAAACGAGCATAGAGTTTGGGCCAGGGCAATCGGAGATGATAAACAGATATTCTATACAACAGGGTGCTAAAAAAGCCATGGAATTTCTCAATGAATTAAAGGGTAGATTAATTGAAGATAAGTTTCATGAGTTTGGGAAAGCCTTATTGGATTGTAGAGCAAAAAGGATTGAGATTACGGATTTCATGGAAAAAGCTAAGAAAATATTAGAGGGTCATCAAGATTTATTATTGAGATTTAACTTTTTCATGCCAATTGGATATAAGTTTAAGCTTCCAGTAGAGGTTAAACAATCTCAGCAAAAGAAGCATGTCAAAATGGAAGATGCTACAAGTTTTTTGAATAAGATAAGGGCTAAATTTCAAGGTGTTGATGACCATATTTACAAATCATGTATAAAGATATTAATTATGTATTATAAGAAGCATATATCTTTCACTAAAGTTTGCAAAGAGATTACCACACTTTTGCAACACCATCCTGACCTTCTTGATGAGTTTCTTAATTTTCTTCCAAAAGCTACATCTTCTCGTTATGTTGCTGCTCAGAACTCAGTGCACGGAGACATATAG 582 0.3368 MVLETSIEFGPGQSEMINRYSIQQGAKKAMEFLNELKGRLIEDKFHEFGKALLDCRAKRIEITDFMEKAKKILEGHQDLLLRFNFFMPIGYKFKLPVEVKQSQQKKHVKMEDATSFLNKIRAKFQGVDDHIYKSCIKILIMYYKKHISFTKVCKEITTLLQHHPDLLDEFLNFLPKATSSRYVAAQNSVHGDI 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01692 193 FunFam Paired amphipathic helix SIN3-like protein 105 177 - -
Vivi2g01692 193 SUPERFAMILY PAH2 domain 104 176 IPR036600 GO:0006355
Vivi2g01692 193 ProSiteProfiles PAH domain profile. 22 90 IPR003822 GO:0006355
Vivi2g01692 193 Gene3D Paired amphipathic helix 28 88 IPR036600 GO:0006355
Vivi2g01692 193 SUPERFAMILY PAH2 domain 21 88 IPR036600 GO:0006355
Vivi2g01692 193 Gene3D Paired amphipathic helix 101 177 IPR036600 GO:0006355
Vivi2g01692 193 ProSiteProfiles PAH domain profile. 106 177 IPR003822 GO:0006355
Vivi2g01692 193 Pfam Paired amphipathic helix repeat 130 174 IPR003822 GO:0006355
Vivi2g01692 193 PANTHER SIN3B-RELATED 28 179 IPR039774 GO:0003714
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01692 Vivi-Chr2 77486167 77487404 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi2g01692 PAH 2.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01692 K11644 - vvo:131646317 389.423