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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vivi2g01677
ATGGGGAGTTCAAGTACAATAAAATCATTAACCACTGAAGATGCCAATATGTATCTGAAAGAAATAAAAATTGCGTTTAAAGATGAAATGTACAAGTACCATGAATTTCTTAGAACCATGAAAGATTTTCAGATAAGAAGAATTGACATAACAGGTGTGATGGCAAGAGTTGAGAAATTATTTCAAAGGCACGAAGAATTACTATTTAAATTTAGTATGTTTTTGCCTGATGGATTTGAAATGAAACCTCCACCAAAAAAGTCTAAGATACCAGTCGTGAGTGTGAGTAAAGAAGATGCTAAAGAATATTTGGGCAAGGTGAAGACTCGATTTCAAAGTCAACTTTACGTATATGATATATTTCTAGCCATAATGAGTATGTACAGAAATAAAGATAAGAGTCTTGAGGAGATCTATGAAATGGTTGTTTCAATTTTTAAGGATCACCCTGATCTTATTGATGGATTTATGAATTTTCTTCCATAA
486
0.3169
MGSSSTIKSLTTEDANMYLKEIKIAFKDEMYKYHEFLRTMKDFQIRRIDITGVMARVEKLFQRHEELLFKFSMFLPDGFEMKPPPKKSKIPVVSVSKEDAKEYLGKVKTRFQSQLYVYDIFLAIMSMYRNKDKSLEEIYEMVVSIFKDHPDLIDGFMNFLP
161
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vivi2g01677
161
PANTHER
SIN3B-RELATED
10
161
IPR039774
GO:0003714
Vivi2g01677
161
FunFam
Paired amphipathic helix protein Sin3
14
76
-
-
Vivi2g01677
161
SUPERFAMILY
PAH2 domain
8
77
IPR036600
GO:0006355
Vivi2g01677
161
FunFam
Paired amphipathic helix SIN3-like protein
93
161
-
-
Vivi2g01677
161
ProSiteProfiles
PAH domain profile.
8
78
IPR003822
GO:0006355
Vivi2g01677
161
ProSiteProfiles
PAH domain profile.
93
161
IPR003822
GO:0006355
Vivi2g01677
161
Pfam
Paired amphipathic helix repeat
32
75
IPR003822
GO:0006355
Vivi2g01677
161
Pfam
Paired amphipathic helix repeat
117
160
IPR003822
GO:0006355
Vivi2g01677
161
Gene3D
Paired amphipathic helix
14
76
IPR036600
GO:0006355
Vivi2g01677
161
Gene3D
Paired amphipathic helix
99
161
IPR036600
GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vivi2g01677
Vivi-Chr2
76558195
76558963
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vivi2g01677
10
86
WRKY Transcription Factor Family
AT4G12020
36.364
4.80e-10
55.5
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TR
Others
Vivi2g01677
PAH
5.2e-13
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vivi2g01677
K11644
-
vvo:131649399
305.064
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