Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01650 ATGGCTTTAAACATGATGTTTCATCTTCTAAGCCATGTTCTTGTTTTACAAATTTTTCTAATACAAACTCACTATTGCCAACCTCAAAATCAGAACATTGAAACTTTTTATCCAATTGAAACTCCACAACAATCCACACCACCATCACCACCATCATCATCACAAGCACCAACATCTTCAACAACATCATCATCATCATCCACAACAAATTCTTCATCAAACAGTAAGATAGTAACTGCTGTAGCAGCAACTGCAGCAGGAACTTTAGTTCTTTCTGCTCTAGTTTTCTTCTTTGTTCTTAAATGCTTTAGAGCAAAGAAAAAGAATGTGAGGGTGAACAACAATAGCAACAACAATGATTCTTCTTTAGTTCATAGAAATGTTGTGCCTCAAGTGAAGAATGTGTTTGAGAGAATGGAAGGTAACATAAAAGGACTTATTGTTGATGAAGATGGCTTGGATGTTGTTTATTGGAGAAAGCTTCAAGATCAAAACTTTGATAAGGATATGAAAAAGGGTGTTTTTTTGAATAGTCCTAGAAACAAAGATCATGATCAAGGGAAGGGTTTAGAGTCCAATAATCAAGAAATTCATTTGCTTAGGGGAAAATCTTCAACCTCACATATGAATATATTTCCACAAGAATCTTCATATACAATTATGAAGATTACACCTCCTGCTCCTCCTCCTCCTATTAATGATTCTTCTCAACCATTTTCTCTAAAGCTTCTTCCTTCTTCGCCAAGAAAGCTCTCTACTTTTTTCTCAACAATTCCAAATGTGACAAATTATCATGGACCATCAATGGTTTCGGATGATAGAAAGAGTCAAGAACCGCCTCCACCTCCGCCACCTCCTCCTCCACCAATAGTACCTGATAGAAAAAGCTCTGCGCCGCCGCCTCCTCCTCCTCCTCCTCCACCGATTCCAGATAGAAAGAGTCTTGCAACACCTCCGCCGCCTCCTCCTCCGATGTCAACTAAAAAGATTTCTACTCCAGCGCCGCCTCCACCACCAAAGACAAGTGGATTGAAACTAAAGTCATCATCAAAACCGCCACCTACCCCTCTTGAAACAAAATCTAGCAACAATATACAAGGGAGTTCTTCAAGTGAAGTGAAACTAAAACCATTGCATTGGGATAAGGTGAATACTAATCTTGATCACTCTATGGTGTGGGACAAAATCGACCGCGGTTCATTCAGGGTTGATGATGGTCTTATGGAAGCTCTATTCGGGTATGTTGCGACCAAACCAACCGGTAACACTTCAAAAGGAAAAGAGTCAACAAGTCCAAACAAGGATGCATCAACAAATGCTTTCATTCTTGACCCTAGAAAATCACAAAACACTGCTATAGTTTTGAAATCTCTTGCAGTCTCGCGAAAAGAAATCATTGATGCACTCGTCGATGGCCAAGGCCTTAATGCAGATACAATTGAAAAGCTTTCAAGAATCGCTCCAACAGAAGAAGAACAGTCTCAGATACTCGAATATGAAGGAGACACAACAAAACTTGCAGCAGCTGAATCTTTCTTGTACCACATCCTCAAAGCTGTTCCTTCGGCATTTAAGCGCTTGAATGCGATTTTATTCAGGTTGAATTATGACTCGGAGATCAAAGAAATCAAGGAGATTCTACAGACACTTGAGATGGCGTGTAAGGAGCTTCGAAACCAAGGAGTTTTCGTGAAACTTCTTGAAGCAGTTCTTAAGGCCGGAAACCGAATGAATGCAGGTACTAATAGAGGTAATGCTCAAGCTTTCAACTTGGTTTCTTTAAGGAAACTCTCTGATGTGAAGAGTGTTGATGGAAAAACCACATTGCTACACTTTGTGGTCGAAGAAGTAGTTCGTTCTGAAGGGAAACGCGCGGTTCTTAACCGCAATCATAGTTTGACTCGTAGTTTCAGTAGGAGCAGTAGCAGCAGCAGTATCGGAGACTCTAAGAATTCTGCTACCTCGGATGAACAAAAACTAATGGAATATATAAAACTAGGATTACCAATTGTAGGAGGGGTCAGTGCCGAGTTTTCCAATGCAAAGAAAATTGCTTTAACAGATTACACTAGTTTCATCGGTTCTATTTCAACACTCTCTGCAAAGATAGTTGAAATTCGACAACTTGTTTTGCAGTGTGGAAATGATAAAGGAGGGAAGTTTGTGAGAGAGATGAACCATTTTCTTGAAAATTCTGAGAAGGATTTGCAACTGGTGAGGGAAGAACAAACAAGGATAATGCAGCTTGTTAAGAGAACAACAGATTATTACCAAGGAGGAGCTTTGAAAGACAGTGCAGGAGAACAGGCTCTTTATCTATTTGTCATAGTGAAGGATTTTCTCGGAATGGTGGATCAAGCGTGTATCGAGATTGCGCGTAACATGCAGAAAAAGAAGACATCTAAGGCAAAGTCTTAA 2418 0.3987 MALNMMFHLLSHVLVLQIFLIQTHYCQPQNQNIETFYPIETPQQSTPPSPPSSSQAPTSSTTSSSSSTTNSSSNSKIVTAVAATAAGTLVLSALVFFFVLKCFRAKKKNVRVNNNSNNNDSSLVHRNVVPQVKNVFERMEGNIKGLIVDEDGLDVVYWRKLQDQNFDKDMKKGVFLNSPRNKDHDQGKGLESNNQEIHLLRGKSSTSHMNIFPQESSYTIMKITPPAPPPPINDSSQPFSLKLLPSSPRKLSTFFSTIPNVTNYHGPSMVSDDRKSQEPPPPPPPPPPPIVPDRKSSAPPPPPPPPPPIPDRKSLATPPPPPPPMSTKKISTPAPPPPPKTSGLKLKSSSKPPPTPLETKSSNNIQGSSSSEVKLKPLHWDKVNTNLDHSMVWDKIDRGSFRVDDGLMEALFGYVATKPTGNTSKGKESTSPNKDASTNAFILDPRKSQNTAIVLKSLAVSRKEIIDALVDGQGLNADTIEKLSRIAPTEEEQSQILEYEGDTTKLAAAESFLYHILKAVPSAFKRLNAILFRLNYDSEIKEIKEILQTLEMACKELRNQGVFVKLLEAVLKAGNRMNAGTNRGNAQAFNLVSLRKLSDVKSVDGKTTLLHFVVEEVVRSEGKRAVLNRNHSLTRSFSRSSSSSSIGDSKNSATSDEQKLMEYIKLGLPIVGGVSAEFSNAKKIALTDYTSFIGSISTLSAKIVEIRQLVLQCGNDKGGKFVREMNHFLENSEKDLQLVREEQTRIMQLVKRTTDYYQGGALKDSAGEQALYLFVIVKDFLGMVDQACIEIARNMQKKKTSKAKS 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01650 805 Gene3D Formin, FH2 domain 386 805 IPR042201 -
Vivi2g01650 805 Coils Coil 540 560 - -
Vivi2g01650 805 SUPERFAMILY Formin homology 2 domain (FH2 domain) 319 801 - -
Vivi2g01650 805 MobiDBLite consensus disorder prediction 258 373 - -
Vivi2g01650 805 MobiDBLite consensus disorder prediction 55 72 - -
Vivi2g01650 805 MobiDBLite consensus disorder prediction 343 373 - -
Vivi2g01650 805 MobiDBLite consensus disorder prediction 417 438 - -
Vivi2g01650 805 Pfam Formin Homology 2 Domain 371 784 IPR015425 -
Vivi2g01650 805 SMART it6_source 365 799 IPR015425 -
Vivi2g01650 805 MobiDBLite consensus disorder prediction 276 342 - -
Vivi2g01650 805 MobiDBLite consensus disorder prediction 220 244 - -
Vivi2g01650 805 PANTHER FORMIN-RELATED 30 795 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vivi2g01650 805 MobiDBLite consensus disorder prediction 39 72 - -
Vivi2g01650 805 ProSiteProfiles Formin homology-2 (FH2) domain profile. 365 805 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01650 Vivi-Chr2 74070510 74074192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01650 348 800 FH2 protein (formin) Gene Family AT1G70140 57.709 2.48e-179 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01650 - - gmx:100780368 851.277