Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01646 ATGGAGACAAACGGTGTCGTTTCGATTGGTGTCGATGCTGAAGAGGTTCATGTTCTGGCCGTTGATGATAGTTTAGTTGATCGGAAAGTCATTGAACGCTTGCTCAAAATTTCAGCTTGTAAAGTTACTGCTGTGGATAGTGGAATCAGAGCACTGCAATTTCTGGGATTGGATGAAGCTGATGGTTTTATCCCGGGTTTGAAGGTGGATCTAGTCATTACTGATTATTGCATGCCTGGAATGACTGGTTATGAGTTGCTCAAGAAAATCAAGGAATCGTCCACTTTCAGAGAAATTCCTGTAGTTATTATGTCTTCTGAAAACATTTTGCCACGCATAGACAGGTGTTTGGAGGAAGGTGCAGAGGATTTTATAGTGAAGCCAGTGAAACTATCTGACGTGAAACGTTTGAAGGGTTACATGACAACAAGAGATGTTAGAGGGGAAATTGAAAACAGAGAAATTAACGTTAACTTTAACGGTAACGTTGAAGGTAACAAAGGAGCGGGAATCAACAACAAAAGGAAATTAGAGGAAGCTTCTGATGAGTTTTCATCAGAACCGTCCGTTTCATCATCACCGTCGACTTCATCGTCGCCTTTGTCTTCTTCACCCGATGTGCTTGATTCTCCGATCCGACGGCTTAAAATGAGTGACACTGAATGA 666 0.4189 METNGVVSIGVDAEEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEADGFIPGLKVDLVITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMTTRDVRGEIENREINVNFNGNVEGNKGAGINNKRKLEEASDEFSSEPSVSSSPSTSSSPLSSSPDVLDSPIRRLKMSDTE 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01646 221 Pfam Response regulator receiver domain 18 134 IPR001789 GO:0000160
Vivi2g01646 221 SUPERFAMILY CheY-like 16 136 IPR011006 -
Vivi2g01646 221 CDD REC_typeA_ARR 18 137 - -
Vivi2g01646 221 ProSiteProfiles Response regulatory domain profile. 17 142 IPR001789 GO:0000160
Vivi2g01646 221 Gene3D - 16 190 - -
Vivi2g01646 221 MobiDBLite consensus disorder prediction 184 206 - -
Vivi2g01646 221 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 185 IPR045279 GO:0009736
Vivi2g01646 221 MobiDBLite consensus disorder prediction 159 221 - -
Vivi2g01646 221 SMART REC_2 16 141 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01646 Vivi-Chr2 73887635 73888998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01646 11 213 Response Regulator Gene Family AT1G59940 56.818 2.70e-72 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi2g01646 Response_reg 1.1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01646 K14492 - gmx:100779833 270.011