Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g01645 | ATGGAGACAAACGGTGTCGTTTCGATTGGTGTCGATGCTGAAGAGGTTCATGTTCTGGCCGTTGATGATAGTTTAGTTGATCGGAAAGTCATTGAACGCTTGCTCAAAATTTCAGCTTGTAAAGTTACTGCTGTGGATAGTGGAATCAGAGCACTGCAATTTCTGGGATTGGATGAAGCTGATGGTTTTATCCCGGGTTTGAAGGTGGATCTAGTCATTACTGATTATTGCATGCCTGGAATGACTGGTTATGAGTTGCTCAAGAAAATCAAGCAGGAATCGTCCACTTTCAGAGAAATTCCTGTAGTTATTATGTCTTCTGAAAACATTTTGCCACGCATAGACAGGTGTTTGGAGGAAGGTGCAGAGGATTTTATAGTGAAGCCAGTGAAACTATCTGACGTGAAACGTTTGAAGGGTTACATGACAACAAGAGATGTTAGAGGGGAAATTGAAAACAGAGAAATTAACGTTAACTTTAACGGTAACGTTGAAGGTAACAAAGGAGCGGGAATCAACAACAAAAGGAAATTAGAGGAAGCTTCTGATGAGTTTTCATCAGAACCGTCCGTTTCATCATCACCGTCGACTTCATCGTCGCCTTTGTCTTCTTCACCCGATGTGCTTGATTCTCCGATCCGACGGCTTAAAATGAGTGACACTGAATGA | 669 | 0.42 | METNGVVSIGVDAEEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEADGFIPGLKVDLVITDYCMPGMTGYELLKKIKQESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMTTRDVRGEIENREINVNFNGNVEGNKGAGINNKRKLEEASDEFSSEPSVSSSPSTSSSPLSSSPDVLDSPIRRLKMSDTE | 222 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g01645 | 222 | Gene3D | - | 16 | 191 | - | - | |
Vivi2g01645 | 222 | MobiDBLite | consensus disorder prediction | 185 | 207 | - | - | |
Vivi2g01645 | 222 | MobiDBLite | consensus disorder prediction | 160 | 222 | - | - | |
Vivi2g01645 | 222 | CDD | REC_typeA_ARR | 18 | 138 | - | - | |
Vivi2g01645 | 222 | Pfam | Response regulator receiver domain | 18 | 135 | IPR001789 | GO:0000160 | |
Vivi2g01645 | 222 | ProSiteProfiles | Response regulatory domain profile. | 17 | 143 | IPR001789 | GO:0000160 | |
Vivi2g01645 | 222 | SMART | REC_2 | 16 | 142 | IPR001789 | GO:0000160 | |
Vivi2g01645 | 222 | SUPERFAMILY | CheY-like | 16 | 137 | IPR011006 | - | |
Vivi2g01645 | 222 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 16 | 186 | IPR045279 | GO:0009736 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g01645 | Vivi-Chr2 | 73887631 | 73888998 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g01645 | 11 | 214 | Response Regulator Gene Family | AT1G59940 | 56.561 | 1.55e-70 | 216 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Vivi2g01645 | Response_reg | 8.4e-22 | CL0304 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g01645 | K14492 | - | gmx:100779833 | 265.388 |