Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01645 ATGGAGACAAACGGTGTCGTTTCGATTGGTGTCGATGCTGAAGAGGTTCATGTTCTGGCCGTTGATGATAGTTTAGTTGATCGGAAAGTCATTGAACGCTTGCTCAAAATTTCAGCTTGTAAAGTTACTGCTGTGGATAGTGGAATCAGAGCACTGCAATTTCTGGGATTGGATGAAGCTGATGGTTTTATCCCGGGTTTGAAGGTGGATCTAGTCATTACTGATTATTGCATGCCTGGAATGACTGGTTATGAGTTGCTCAAGAAAATCAAGCAGGAATCGTCCACTTTCAGAGAAATTCCTGTAGTTATTATGTCTTCTGAAAACATTTTGCCACGCATAGACAGGTGTTTGGAGGAAGGTGCAGAGGATTTTATAGTGAAGCCAGTGAAACTATCTGACGTGAAACGTTTGAAGGGTTACATGACAACAAGAGATGTTAGAGGGGAAATTGAAAACAGAGAAATTAACGTTAACTTTAACGGTAACGTTGAAGGTAACAAAGGAGCGGGAATCAACAACAAAAGGAAATTAGAGGAAGCTTCTGATGAGTTTTCATCAGAACCGTCCGTTTCATCATCACCGTCGACTTCATCGTCGCCTTTGTCTTCTTCACCCGATGTGCTTGATTCTCCGATCCGACGGCTTAAAATGAGTGACACTGAATGA 669 0.42 METNGVVSIGVDAEEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEADGFIPGLKVDLVITDYCMPGMTGYELLKKIKQESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMTTRDVRGEIENREINVNFNGNVEGNKGAGINNKRKLEEASDEFSSEPSVSSSPSTSSSPLSSSPDVLDSPIRRLKMSDTE 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01645 222 Gene3D - 16 191 - -
Vivi2g01645 222 MobiDBLite consensus disorder prediction 185 207 - -
Vivi2g01645 222 MobiDBLite consensus disorder prediction 160 222 - -
Vivi2g01645 222 CDD REC_typeA_ARR 18 138 - -
Vivi2g01645 222 Pfam Response regulator receiver domain 18 135 IPR001789 GO:0000160
Vivi2g01645 222 ProSiteProfiles Response regulatory domain profile. 17 143 IPR001789 GO:0000160
Vivi2g01645 222 SMART REC_2 16 142 IPR001789 GO:0000160
Vivi2g01645 222 SUPERFAMILY CheY-like 16 137 IPR011006 -
Vivi2g01645 222 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 186 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01645 Vivi-Chr2 73887631 73888998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01645 11 214 Response Regulator Gene Family AT1G59940 56.561 1.55e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi2g01645 Response_reg 8.4e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01645 K14492 - gmx:100779833 265.388