Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01632 ATGCTCCCTACCCTAAATATCATCGGCGATGTTGTTCTCGTCGAACACCTGTCTCCGCGGATTGGGAAAGTCGGTCACGGTGACTTAGTTCTTGTGACGTCACCTTTGAACCCTAATCGGAACTTGATAAAGCGTGTTGTTGCTATGGAAGGGGATACTGTTACTTTCTTTGATGCTTCAGGTTTTGTTTCCTCTAGAACTGTTGTGGCGTACGGACCTAGCATGCTCCCTACCCTAAATATTATCGGTGATGTTGTTCTCGTCGAACACCTGTCTCCGCGGATTGGGAAAGTTGGTCATGGTGACTTAGTTCTTGTGACGTCACCTTTGAACCCTAATCGGAACTTGACAAAGCGTGTTGTTGCTATGGAAGGGGATACTGTTACTTTCTTTGATGCTTCAGGTTTTGTTTCCTCTTGA 420 0.4595 MLPTLNIIGDVVLVEHLSPRIGKVGHGDLVLVTSPLNPNRNLIKRVVAMEGDTVTFFDASGFVSSRTVVAYGPSMLPTLNIIGDVVLVEHLSPRIGKVGHGDLVLVTSPLNPNRNLTKRVVAMEGDTVTFFDASGFVSS 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01632 139 Gene3D Umud Fragment, subunit A 72 138 - -
Vivi2g01632 139 Gene3D Umud Fragment, subunit A 1 71 - -
Vivi2g01632 139 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 67 131 - -
Vivi2g01632 139 SUPERFAMILY LexA/Signal peptidase 68 131 IPR036286 -
Vivi2g01632 139 CDD S26_SPase_I 1 52 IPR019533 GO:0004252|GO:0006465
Vivi2g01632 139 CDD S26_SPase_I 66 126 IPR019533 GO:0004252|GO:0006465
Vivi2g01632 139 Pfam Signal peptidase, peptidase S26 70 131 IPR019533 GO:0004252|GO:0006465
Vivi2g01632 139 Pfam Signal peptidase, peptidase S26 1 58 IPR019533 GO:0004252|GO:0006465
Vivi2g01632 139 SUPERFAMILY LexA/Signal peptidase 1 57 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01632 Vivi-Chr2 72974420 72974939 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01632 1 69 MADS-box Gene Family AT1G29960 44.286 8.36e-14 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01632 K09647 - cave:132173278 101.293