Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g01600 | ATGACAAAGAAGCTGTGCGCAACATGTGCTAAGAAGAGGCCAGTTGTTAATTTCGAACATGCTTCGAAATTTATTTCCAAAGTGAATGTTCGATTTCGACGTGCTCGTCATCGCCATATATATACAAAGTTTTTAGAGACACTGATAATGTATCTGGATGGAGAAAACACTGTTGATGGTGTTTGCAAAGAGGTTTATTCACTTTTTGAAGGCCATGATGATCTCATTGATGGGTTTAATGATTTTCTTCCATAG | 255 | 0.3725 | MTKKLCATCAKKRPVVNFEHASKFISKVNVRFRRARHRHIYTKFLETLIMYLDGENTVDGVCKEVYSLFEGHDDLIDGFNDFLP | 84 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g01600 | 84 | Pfam | Paired amphipathic helix repeat | 39 | 83 | IPR003822 | GO:0006355 | |
Vivi2g01600 | 84 | Gene3D | Paired amphipathic helix | 10 | 84 | IPR036600 | GO:0006355 | |
Vivi2g01600 | 84 | PANTHER | SIN3B-RELATED | 16 | 84 | IPR039774 | GO:0003714 | |
Vivi2g01600 | 84 | SUPERFAMILY | PAH2 domain | 14 | 84 | IPR036600 | GO:0006355 | |
Vivi2g01600 | 84 | ProSiteProfiles | PAH domain profile. | 13 | 84 | IPR003822 | GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g01600 | Vivi-Chr2 | 71967361 | 71968394 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g01600 | 2 | 83 | WRKY Transcription Factor Family | AT4G12020 | 30.435 | 9.87e-06 | 40.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Vivi2g01600 | PAH | 2.6e-11 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g01600 | - | K11644 | vvo:131646273 | 177.948 |