Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01585 ATGTCAACACTTGTTCAATTATTGATATCAGTGATGCTACTTTTCTTTTTTATGCCTGTTTTATCTCAGGTTAACCAGTTCTTGTATGCAGGATTCAAGGATATTGATCCCAACAATCTAACCTTGAATGGATTTGCAGAGATAGAGAAGAATGGAATATTAAGATTGACAAACCACACAAACAATGTAATGGGTCATGCTTTTTACTCATTACCTTTTCAGCTAAAGAATTCAACAACTTGTAAATCTTTCTCATTTTCTTCATCTTTTGCTCTTGCTGTTGTGCCTGAGTATCCTAAAGTAGGTGGTCATGGCATGGCTTTCACAATTGCTACTAATAAGGATCTCAATGGTTCACCTATTCAGTATCTTGGTCTTTTCAATTCAAGTAATGTTGGTAATTTCCCTAACCATGTTTTTGCTGTTGAGTTTGACACTGTACTAGACTTTGGTTTTGATGATATCAATGATAACCATGTTGGAATAGACATCAATGGATTGAAATCCAATGCATCTGTTACTGCTGGCTATTACACTGATAATCATTCAATAAAACAAGAACTTCTTAATATCAAAAGTGGGAAACCATTTCTAGCTTGGGTTGATTATGATTCTTCAATGAATCTTGTGAGTGTTACACTTTCTCCAACTTCAACCAAACCCAAAAAACCAACCTTGTCTTTTCATGTTGATCTATCACCTATTCTTCATGATACTATGTATGTTGGATTCTCGGCTTCAACTGGTTTGCAGCTGGCTAGCTCTCATCACATCTTGGGTTGGAGCTTTAAAATCAATGGACAAGCACCAGCACTTGATTTGTCTTCACTCCCACAACTAGCACAACCAAAGAAGAGAAACACTTCTCTGATAACCGGTGTCTCGGTCACAGTTTCGATTGTCGCATTGTGTTCTATAGCTATTGGTATTTACATTTTCAGAAAAATCAAGAATGCTAATATGATAGAACCATGGGAGCTTGAAGTTGGGCCACACAGATACTCCTATCGAGAGCTTCACAAAGCTACAAATGGTTTCAAGGAGAAAGAGCTACTTGGGCAAGGTGGTTTTGGGAGAGTTTACAAAGGGACACTACCAAATTCAAATATTCAAGTAGCTGTTAAGAGAGTTTCACATGAATCAAAACAAGGACTAAGGGAATTTGTGTCTGAAATCGCCAGCATAGGCCGACTTCGCCACAGGAATTTGGTTCAGTTACTCGGATGGTGTCGACGCAAAGGCGACCTCCTACTTGTGTATGACTTCATGGCTAATGGAAGCTTAGACAAGTGCTTGTTTGAAAAGACAAAGATTCTGTTAAGTTGGGAACAAAGGTTCAAGATAATAAAGGATGTTGCTTCGGGTCTTTTATATCTACATGAAGGCTATGAGCAAGTAGTAATACACAGAGATGTTAAGTCTAGCAATGTTCTGCTAGATTTTGAACTCAATGGAAGATTAGGTGATTTCGGTTTGGCAAGATTATATGAACATGATGCTAATCCAGGGACAACAAAAGTGGTGGGAACCTTAGGCTATTTAGCACCAGAGTTACCTAGAACAGGTAAATCATCTACAAGTTGTGATGTTTTTGCATTTGGTGCATTTTTGCTTGAGGTTACTTGTGGGAGAAGGCCTATTGAGCCAAAGGCATTACCAGAAGAGTTGGTGTTGGAGGATTTGGTTTGGGAAAGGTACAGAGAAGGAAGAATGCTTGAAGTAGTGGACAAAAAGTTGAATGGAGAGTTTGATGAAAGTGAGGTAATGATGGTGTTGAATTTGGGATTGATATGTTCAAATGATGTTCCTATGATAAGGCCTAGTATGAGACAAGTAGTGAGGATTTTGGATGGAGAAGTTGAGTTGCATGATGACTTGAGAAAGCCAGAAGGTGTTGATCCACAAGAGGGGTTTGATGAATTTTTGCACTCTCTTGCATTTTCCTCAAATGATATTAGGAGTTCAAGCTCTTATCTAGGAAATTCAGACACTGATGATACTTGTTATATCTCTTTTCCTAGTTCACCTCAATCACTTCTCAATCCTAGAAGATAA 2055 0.382 MSTLVQLLISVMLLFFFMPVLSQVNQFLYAGFKDIDPNNLTLNGFAEIEKNGILRLTNHTNNVMGHAFYSLPFQLKNSTTCKSFSFSSSFALAVVPEYPKVGGHGMAFTIATNKDLNGSPIQYLGLFNSSNVGNFPNHVFAVEFDTVLDFGFDDINDNHVGIDINGLKSNASVTAGYYTDNHSIKQELLNIKSGKPFLAWVDYDSSMNLVSVTLSPTSTKPKKPTLSFHVDLSPILHDTMYVGFSASTGLQLASSHHILGWSFKINGQAPALDLSSLPQLAQPKKRNTSLITGVSVTVSIVALCSIAIGIYIFRKIKNANMIEPWELEVGPHRYSYRELHKATNGFKEKELLGQGGFGRVYKGTLPNSNIQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRKGDLLLVYDFMANGSLDKCLFEKTKILLSWEQRFKIIKDVASGLLYLHEGYEQVVIHRDVKSSNVLLDFELNGRLGDFGLARLYEHDANPGTTKVVGTLGYLAPELPRTGKSSTSCDVFAFGAFLLEVTCGRRPIEPKALPEELVLEDLVWERYREGRMLEVVDKKLNGEFDESEVMMVLNLGLICSNDVPMIRPSMRQVVRILDGEVELHDDLRKPEGVDPQEGFDEFLHSLAFSSNDIRSSSSYLGNSDTDDTCYISFPSSPQSLLNPRR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01585 684 FunFam L-type lectin-domain containing receptor kinase S.4 23 271 - -
Vivi2g01585 684 FunFam Lectin-domain containing receptor kinase A4.3 331 422 - -
Vivi2g01585 684 SUPERFAMILY Protein kinase-like (PK-like) 328 621 IPR011009 -
Vivi2g01585 684 Gene3D Phosphorylase Kinase; domain 1 331 422 - -
Vivi2g01585 684 Pfam Protein kinase domain 346 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g01585 684 Gene3D - 24 275 - -
Vivi2g01585 684 SMART serkin_6 346 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g01585 684 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Vivi2g01585 684 ProSiteProfiles Protein kinase domain profile. 346 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g01585 684 Gene3D Transferase(Phosphotransferase) domain 1 423 629 - -
Vivi2g01585 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Vivi2g01585 684 Pfam Legume lectin domain 26 277 IPR001220 GO:0030246
Vivi2g01585 684 PANTHER - 22 629 - -
Vivi2g01585 684 FunFam L-type lectin-domain containing receptor kinase S.4 423 629 - -
Vivi2g01585 684 CDD lectin_legume_LecRK_Arcelin_ConA 26 267 IPR001220 GO:0030246
Vivi2g01585 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 283 IPR013320 -
Vivi2g01585 684 CDD STKc_IRAK 352 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01585 Vivi-Chr2 70499173 70501458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01585 20 683 Receptor kinase-like Gene Family AT3G55550 57.058 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi2g01585 Pkinase 6.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01585 - - gmx:100784346 978.008