Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01538 ATGTCGCTCTCCTACTCCAACTTCTTCCCCGATGACGACCTCCTATGCTGCGAGGAAACCTCCAGCATCTTGTCCGGAGATTCGCCGATGGAAAGCTTATCTGATGTCGATTCGTCTCCGCCGCCGGAGGAGGTGTTCATCGCCGGATTAATCGATGACGAACATAAGTTCGTCCTCGGATTTGACTACTTCTCTAAGTTACAGTCTCGCAAGATCGATGCATCGGCCAGAACCGAATCCGTTGCATGGATCCTAAAGCAATCAAATGGGTGGCCACTGCAACTTCTATCGGTTGCTTCCTTGTCTCTAGCGGCCAAGATGGAGGAAACTCTAGTCCCTTCTCTATTGGACCTTCAGGTAGAAGGTGCCAAATACATATTTGAACCCAGAACAATTAGGAGAATGGAGCTACTTGTTCTAAGTGTCTTGGATTGGAGGCTAAGATCAGTTACTCCATTTAGCTTCCTCAGTTTCTTTGCATGCAAGTTAGATTCAACCGGAATTTTTACCGGGTTCCTCATTTCACGAGCTACACAAATTATCTTATCTCATATCCAAGAAGCAAACTTTCTTGCATATTGGCCATCATGCATTGCCGCAGCGGCTATTCTCTATGCAGCTAATGAAATTCCTAATTGGTCGCAAGTTGAGCCGGAGCATGCCGAGACATGGTGCGAGGGGCTAAGAAAAGAGAAAATTAAAGGGTGCTACAGGTTAATGGAAGAACTTATGATTGACAATAACCAAAGGAAAGCCCCTAAAGTGTTGCCACAGCTGCGAGTGACGACTCAGCCACTAATGAGGTCAAGTGTCTCGTCATCCTCCTCCTCTTCTCCTTCCTCCTCACCATCCTATAATAAAAGAAGGAAATTGAATAACTGTTGGTGGGTAGATGATGACAAAGGAAACTCCCTATGA 918 0.4597 MSLSYSNFFPDDDLLCCEETSSILSGDSPMESLSDVDSSPPPEEVFIAGLIDDEHKFVLGFDYFSKLQSRKIDASARTESVAWILKQSNGWPLQLLSVASLSLAAKMEETLVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWRLRSVTPFSFLSFFACKLDSTGIFTGFLISRATQIILSHIQEANFLAYWPSCIAAAAILYAANEIPNWSQVEPEHAETWCEGLRKEKIKGCYRLMEELMIDNNQRKAPKVLPQLRVTTQPLMRSSVSSSSSSSPSSSPSYNKRRKLNNCWWVDDDKGNSL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01538 305 SUPERFAMILY Cyclin-like 132 249 IPR036915 -
Vivi2g01538 305 SMART Cyclin_C_2 150 277 IPR004367 -
Vivi2g01538 305 PANTHER CYCLINS 76 245 IPR039361 -
Vivi2g01538 305 SUPERFAMILY Cyclin-like 48 147 IPR036915 -
Vivi2g01538 305 Gene3D - 149 237 - -
Vivi2g01538 305 Pfam Cyclin, N-terminal domain 93 147 IPR006671 -
Vivi2g01538 305 Pfam Cyclin, C-terminal domain 150 260 IPR004367 -
Vivi2g01538 305 CDD CYCLIN_AtCycD-like_rpt2 150 240 - -
Vivi2g01538 305 Gene3D - 90 148 - -
Vivi2g01538 305 MobiDBLite consensus disorder prediction 266 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01538 Vivi-Chr2 68514697 68518414 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01538 1 304 Core Cell Cycle Gene Families AT1G70210 52.976 8.68e-103 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01538 K18810 - gmx:100780369 419.468