Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01448 ATGGTGAGCCACGTGGATGGGGTCTTTGCAATTCTTACTCTTTCTATGCTACCTTCCACTAACTCATCTTACTTGCAAGAAAATCAAAGCTGTTTCGTTTTCTATCTTTCTTGGAAACCCAAAATTACTGTTTGCTTTACTAAATCTGTTTTATCATTGCAGCTTGCTCTTTCCCATGTCTCTCCAATCTTAGTTTGTCTATTATCTTCTACTTCCGCTTTCCTCCCTCCTCATTTCTCACCAAACTGCCATTCATCTTCATCTTTCCATTTTCCTTTTTTTTTTGAAAGCTTTTGTTCAGCATGGCTCGACCGATGGAGAAAGTTGTGGACATCAAACGACTCCAAGGAACTTTGGAAAGTGGCGATTAGAGTTGTCCATAAATGGAAGGTAGTCTCCAACAACAAGGAGCACTTTGAGATGATCTATCAAGACAAAGAAGGGTCTGACATTCACGTAGTTGTTCCAAATACGTGCATGGCCGCTTATAATGACAAGTTTGAGGTGGACAACACGTACACTGTCTCCAACTTTGCAGTGCAGCCAAATAACTTGGTTTTTAAACCAAGCACTCACAAGTTCTTGGTGAAGTTCACAGGAGGAACTTCTGTGAATGATGTCAACAAACACGACATACCCCCCATGCAACGCACCTTCACCAATTTCCCTGATATTATGACCGGCAAGTTTAAGAAGAATGTGTTGATCGACGTTATTGGCGTGATCGATGCTATTGGATATCAACAAACTCAAAGTGGTGGGAAAAAAATGCAGGTCAATTTTGTACTGAGGGATGCAGCCAACAACACAATGAACTGTACCCTCTGGGAGGACTATGCCAAAAAGTTTTTCAAGTTTCACGAGGAAAATCCAACAACCTCTGGACCAACTGTGATTTTGCTTAGCTATGCAAAAGTTAAGGAACAGGGCCAATACCCGCTATCGGTTACAAATACATTCCATGTTACAAAACTCCAGATCAATCCAGATTTGCCTTCTGTTAAAGACTTCGTAAATGGTTTCTCAAAGGAAGCTTTGCGTACCGTCTCAAGCCAGCTCAGCTCATACTCTCAGTAA 1077 0.4141 MVSHVDGVFAILTLSMLPSTNSSYLQENQSCFVFYLSWKPKITVCFTKSVLSLQLALSHVSPILVCLLSSTSAFLPPHFSPNCHSSSSFHFPFFFESFCSAWLDRWRKLWTSNDSKELWKVAIRVVHKWKVVSNNKEHFEMIYQDKEGSDIHVVVPNTCMAAYNDKFEVDNTYTVSNFAVQPNNLVFKPSTHKFLVKFTGGTSVNDVNKHDIPPMQRTFTNFPDIMTGKFKKNVLIDVIGVIDAIGYQQTQSGGKKMQVNFVLRDAANNTMNCTLWEDYAKKFFKFHEENPTTSGPTVILLSYAKVKEQGQYPLSVTNTFHVTKLQINPDLPSVKDFVNGFSKEALRTVSSQLSSYSQ 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01448 358 Pfam Domain of unknown function DUF223 141 235 IPR003871 -
Vivi2g01448 358 Gene3D - 111 209 IPR012340 -
Vivi2g01448 358 Gene3D - 210 350 IPR012340 -
Vivi2g01448 358 SUPERFAMILY Nucleic acid-binding proteins 218 342 IPR012340 -
Vivi2g01448 358 CDD RPA1_DBD_A_like 120 204 - -
Vivi2g01448 358 CDD RPA1_DBD_B_like 237 338 - -
Vivi2g01448 358 SUPERFAMILY Nucleic acid-binding proteins 116 204 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01448 Vivi-Chr2 62666403 62679942 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01448 119 354 Core DNA Replication Machinery Family AT2G06510 21.545 1.71e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01448 - - vvo:131650966 693.73