Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01446 ATGATCTATCAAGACAAAGAAGGGTCTGACATTCACGTAGTTGTTCCAAATACGTGCATGGCCGCTTATAATGACAAGTTTGAGGTGGACAACACGTACACTGTCTCCAACTTTGCAGTGCAGCCAAATAACTTGGTTTTTAAACCAAGCACTCACAAGTTCTTGGTGAAGTTCACAGGAGGAACTTCTGTGAATGATGTCAACAAACACGACATACCCCCCATGCAACGCACCTTCACCAATTTCCCTGATATTATGACCGGCAAGTTTAAGAAGAATGTGTTGATCGACGTTATTGGCGTGATCGATGCTATTGGATATCAACAAACTCAAAGTGGTGGGAAAAAAATGCAGGTCAATTTTGTACTGAGGGATGCAGCCAACAACACAATGAACTGTACCCTCTGGGAGGACTATGCCAAAAAGTTTTTCAAGTTTCACGAGGAAAATCCAACAACCTCTGGACCAACTGTGATTTTGCTTAGCTATGCAAAAGTTAAGGAACAGGGCCAATACCCGCTATCGGTTACAAATACATTCCATGTTACAAAACTCCAGATCAATCCAGATTTGCCTTCTGTTAAAGACTTCGTAAATGGTTTCTCAAAGGAAGCTTTGCGTACCGTCTCAAGCCAGCTCAGCTCATACTCTCAGTAA 657 0.4231 MIYQDKEGSDIHVVVPNTCMAAYNDKFEVDNTYTVSNFAVQPNNLVFKPSTHKFLVKFTGGTSVNDVNKHDIPPMQRTFTNFPDIMTGKFKKNVLIDVIGVIDAIGYQQTQSGGKKMQVNFVLRDAANNTMNCTLWEDYAKKFFKFHEENPTTSGPTVILLSYAKVKEQGQYPLSVTNTFHVTKLQINPDLPSVKDFVNGFSKEALRTVSSQLSSYSQ 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01446 218 CDD RPA1_DBD_A_like 1 64 - -
Vivi2g01446 218 Gene3D - 70 210 IPR012340 -
Vivi2g01446 218 Pfam Domain of unknown function DUF223 2 95 IPR003871 -
Vivi2g01446 218 Gene3D - 1 69 IPR012340 -
Vivi2g01446 218 SUPERFAMILY Nucleic acid-binding proteins 78 202 IPR012340 -
Vivi2g01446 218 CDD RPA1_DBD_B_like 97 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01446 Vivi-Chr2 62666403 62680347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01446 5 205 Core DNA Replication Machinery Family AT4G19130 20.388 2.22e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01446 - - vvo:131650966 446.047