Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01444 ATGATGGTGAACAAATTTTTATTACAACTACTTTCTCCTCTCAATTCAAACAATGGGACCCGGGAAGAGAGAAAAAAAGCATTACTCACCTCAACTGTGATTTCATTGATTAATAAGGGGTCTGACATTCACGTAGTTGTTCCAAATACGTGCATGGCCGCTTATAATGACAAGTTTGAGGTGGACAACACGTACACTGTCTCCAACTTTGCAGTGCAGCCAAATAACTTGGTTTTTAAACCAAGCACTCACAAGTTCTTGGTGAAGTTCACAGGAGGAACTTCTGTGAATGATGTCAACAAACACGACATACCCCCCATGCAACGCACCTTCACCAATTTCCCTGATATTATGACCGGCAAGTTTAAGAAGAATGTGTTGATCGACGTTATTGGCGTGATCGATGCTATTGGATATCAACAAACTCAAAGTGGTGGGAAAAAAATGCAGGTCAATTTTGTACTGAGGGATGCAGCCAACAACACAATGAACTGTACCCTCTGGGAGGACTATGCCAAAAAGTTTTTCAAGTTTCACGAGGAAAATCCAACAACCTCTGGACCAACTGTGATTTTGCTTAGCTATGCAAAAGTTAAGGAACAGGGCCAATACCCGCTATCGGTTACAAATACATTCCATGTTACAAAACTCCAGATCAATCCAGATTTGCCTTCTGTTAAAGACTTCGTAAATGGTTTCTCAAAGGAAGCTTTGCGTACCGTCTCAAGCCAGCTCAGCTCATACTCTCAGTAA 753 0.4143 MMVNKFLLQLLSPLNSNNGTREERKKALLTSTVISLINKGSDIHVVVPNTCMAAYNDKFEVDNTYTVSNFAVQPNNLVFKPSTHKFLVKFTGGTSVNDVNKHDIPPMQRTFTNFPDIMTGKFKKNVLIDVIGVIDAIGYQQTQSGGKKMQVNFVLRDAANNTMNCTLWEDYAKKFFKFHEENPTTSGPTVILLSYAKVKEQGQYPLSVTNTFHVTKLQINPDLPSVKDFVNGFSKEALRTVSSQLSSYSQ 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01444 250 SUPERFAMILY Nucleic acid-binding proteins 110 234 IPR012340 -
Vivi2g01444 250 CDD RPA1_DBD_B_like 129 230 - -
Vivi2g01444 250 Gene3D - 102 242 IPR012340 -
Vivi2g01444 250 Pfam Domain of unknown function DUF223 38 127 IPR003871 -
Vivi2g01444 250 Gene3D - 12 101 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01444 Vivi-Chr2 62666403 62680349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01444 40 246 Core DNA Replication Machinery Family AT2G06510 22.642 3.64e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01444 - - vvo:131646216 443.351