Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01443 ATGATGGTGAACAAATTTTTATTACAACTACTTTCTCCTCTCAATTCAAACAATGGGACCCGGGAAGAGAGAAAAAAAGCATTACTCACCTCAACTGTGATTTCATTGATTAATAAGCTTGCTCTTTCCCATGTCTCTCCAATCTTAGTTTGTCTATTATCTTCTACTTCCGCTTTCCTCCCTCCTCATTTCTCACCAAACTGCCATTCATCTTCATCTTTCCATTTTCCTTTTTTTTTTGAAAGCTTTTGTTCAGCATGGCTCGACCGATGGAGAAAGTTGTGGACATCAAACGACTCCAAGGAACTTTGGAAAGTGGCGATTAGAGTTGTCCATAAATGGAAGGTAGTCTCCAACAACAAGGAGCACTTTGAGATGATCTATCAAGACAAAGAAGGGTCTGACATTCACGTAGTTGTTCCAAATACGTGCATGGCCGCTTATAATGACAAGTTTGAGGTGGACAACACGTACACTGTCTCCAACTTTGCAGTGCAGCCAAATAACTTGGTTTTTAAACCAAGCACTCACAAGTTCTTGGTGAAGTTCACAGGAGGAACTTCTGTGAATGATGTCAACAAACACGACATACCCCCCATGCAACGCACCTTCACCAATTTCCCTGATATTATGACCGGCAAGTTTAAGAAGAATGTGTTGATCGACGTTATTGGCGTGATCGATGCTATTGGATATCAACAAACTCAAAGTGGTGGGAAAAAAATGCAGGTCAATTTTGTACTGAGGGATGCAGCCAACAACACAATGAACTGTACCCTCTGGGAGGACTATGCCAAAAAGTTTTTCAAGTTTCACGAGGAAAATCCAACAACCTCTGGACCAACTGTGATTTTGCTTAGCTATGCAAAAGTTAAGGAACAGGGCCAATACCCGCTATCGGTTACAAATACATTCCATGTTACAAAACTCCAGATCAATCCAGATTTGCCTTCTGTTAAAGACTTCGTAAATGGTTTCTCAAAGGAAGCTTTGCGTACCGTCTCAAGCCAGCTCAGCTCATACTCTCAGTAA 1032 0.4128 MMVNKFLLQLLSPLNSNNGTREERKKALLTSTVISLINKLALSHVSPILVCLLSSTSAFLPPHFSPNCHSSSSFHFPFFFESFCSAWLDRWRKLWTSNDSKELWKVAIRVVHKWKVVSNNKEHFEMIYQDKEGSDIHVVVPNTCMAAYNDKFEVDNTYTVSNFAVQPNNLVFKPSTHKFLVKFTGGTSVNDVNKHDIPPMQRTFTNFPDIMTGKFKKNVLIDVIGVIDAIGYQQTQSGGKKMQVNFVLRDAANNTMNCTLWEDYAKKFFKFHEENPTTSGPTVILLSYAKVKEQGQYPLSVTNTFHVTKLQINPDLPSVKDFVNGFSKEALRTVSSQLSSYSQ 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01443 343 CDD RPA1_DBD_B_like 222 323 - -
Vivi2g01443 343 Gene3D - 96 194 IPR012340 -
Vivi2g01443 343 SUPERFAMILY Nucleic acid-binding proteins 203 327 IPR012340 -
Vivi2g01443 343 Gene3D - 195 335 IPR012340 -
Vivi2g01443 343 SUPERFAMILY Nucleic acid-binding proteins 101 189 IPR012340 -
Vivi2g01443 343 Pfam Domain of unknown function DUF223 126 220 IPR003871 -
Vivi2g01443 343 CDD RPA1_DBD_A_like 105 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01443 Vivi-Chr2 62666403 62680350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01443 104 339 Core DNA Replication Machinery Family AT2G06510 21.545 9.06e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01443 - - vvo:131650966 589.726