Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01427 ATGTCTCCAACGGCGATGAGAATTATTGCTCCTTTATCACTTGTTTTACTGCTAGCATCTGCATCAGAAGCAGCGGTCTCTCAACCTCGAGTGCACATAGAACTCCTCAACAAGTTATCTGATAACAAAAAGCTAACCATTCATTGCTACGAAAGATATCGCGACGATCTAGGTGAGTGGATAATCCCACCCGGAGAACAACACATATTTGCATTCACGCCAGGAACAGTTGATAAACCGACCAAGTATTATTATTGTAGTGTAAAATGGGATGGTTCAAACCTAAATTGGTTTGATTTGTGGTCACGAGAAAAGGATTATAATGCATGCAAAGTTTGCAAATGGATCGTAAATGAGAAGGAAGCTTGTAGGTTTGATTATGATACAGGAGCTTATTCTGTTTGTGTTGTCTATAGACAACAACGAATGAACTAA 435 0.3931 MSPTAMRIIAPLSLVLLLASASEAAVSQPRVHIELLNKLSDNKKLTIHCYERYRDDLGEWIIPPGEQHIFAFTPGTVDKPTKYYYCSVKWDGSNLNWFDLWSREKDYNACKVCKWIVNEKEACRFDYDTGAYSVCVVYRQQRMN 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01427 144 Pfam Plant self-incompatibility protein S1 32 136 IPR010264 -
Vivi2g01427 144 PANTHER - 30 126 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01427 Vivi-Chr2 61987233 61987667 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01427 24 143 Carbohydrate Esterase AT3G16970 23.387 8.41e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01427 - K22225 vvo:131649196 297.745