Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01426 ATGTCTCCAACGTTGATTAGATTTATTGCTCCTTTATCACTTGTTTTATTGCTGGTATATGCATCAGAAGCAGCAATCTTTCCCCATGGAGTGCATATAGAGCTCCTCAACAAGTTATCTGATAACAAAAAGCTAACCATTCATTGCTATGAAAGATATGGCGAAGATCTAGGTGAGTTGGTTGTTCCCCCTGGCGGGCAATTCAACTTTGCATTCGTGCCCAGAGTAGTCGGCAAATCGAGCAAGTATTATTGTAGTGTTAAATGGGATGGTTCCAATCTCAAATGGTTTGATTTGTGGTCACAAGGAAGGGATTATAATGCATGCAGAGTTTGCAAATGGATAGTAAATGAGAAGGAAGCTTGTAGGTTTGATTATGGTACAGGAGCTTATTCTGTTTGTGTTGTCTACAATCAATGA 420 0.3952 MSPTLIRFIAPLSLVLLLVYASEAAIFPHGVHIELLNKLSDNKKLTIHCYERYGEDLGELVVPPGGQFNFAFVPRVVGKSSKYYCSVKWDGSNLKWFDLWSQGRDYNACRVCKWIVNEKEACRFDYGTGAYSVCVVYNQ 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01426 139 PANTHER - 28 124 IPR010264 -
Vivi2g01426 139 Pfam Plant self-incompatibility protein S1 32 135 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01426 Vivi-Chr2 61979172 61979591 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01426 33 139 Carbohydrate Esterase AT3G16970 28.829 7.23e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01426 - K01053 vvo:131649196 226.868