Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01420 ATGTCTCCAATGTTGATGAGAGTTGTTGTTCATATTTCTCTTGTTTTATTGCTTGTAGTTTCATCTGAAGCATTTTTCAAACGCAGTACAGTGCATATAGAGGTCACCAATCGTTTATCTAATTACAATGATTTAATCCTTCATTGCTACGAGAGAGAAGGAGAAGATCTAGGCGTGAAGATACTCCTACCTTTGGAGAAATTCGAATTTTCTTTCAAGCCAAGAATGGGTTTTAAATCGAGCAAGTATTATTGTAGTGCTAAATGGGATGGTTCCGACATCAAATGGTTTGATTTGTGGTCAAAAGGAAGAGATGGTAGAGAAGGCTTACAAATCAAATGGGATGTAACAAATAATAAAGCTTGTAGGTTTGCACAAGATACAGGAACTTATTCTGTTTGTGTTGTCTGGAACTAA 417 0.3597 MSPMLMRVVVHISLVLLLVVSSEAFFKRSTVHIEVTNRLSNYNDLILHCYEREGEDLGVKILLPLEKFEFSFKPRMGFKSSKYYCSAKWDGSDIKWFDLWSKGRDGREGLQIKWDVTNNKACRFAQDTGTYSVCVVWN 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01420 138 PANTHER - 29 124 IPR010264 -
Vivi2g01420 138 Pfam Plant self-incompatibility protein S1 32 137 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01420 Vivi-Chr2 61700186 61700602 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01420 4 138 Carbohydrate Esterase AT3G16970 22.143 2.67e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01420 - K19872 vvo:131649196 130.183