Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01414 ATGGGACGATTGCTACCATTTCTGGGGATGATGATAGCTGTTTTATTACAAAGTGGAAGCTTTGTTGTAATTAAACTTGCAACAAAAGATGGAATTAACAAATATGTAATGGTTGTTTATTCCATGGCACTTTCCACCATCTTGCTTCTCCCATTTGCTTTCTTTAACAACAGGTCACAGTGTCCTCCTCTCACCTTCTCTATACTTTGCAGCTTCTTTTTCCTTGCTCTCTTAGGAACTTCAACACAGATACTGAGTTATGGAGGCATAGAACTCAGTTCACCGACTCTTGTATCAGCAATGCTTAACCTCATTCCAGCTTTCACCTTCGTACTTGCTGTTGTTTTCAGGATGGAAAAAGTACATTGGAGACATTATAGCAGCCAAGCTAAAGTGATAGGAACTATAGCATCAATGGGTGGAGCATTTGTTGTCATATTGTACAAAGGTCCACCAATCTTCAACATACATTCATCAAGTTCTTACAACACACTTCAATTTTCACCAAACTTGAACTGGATTTTGGGAGGGTTGTTAAGTGTCGGCGATTCTTTAGTTTCATCCATTTGGTACATATATCAGGTTTCAGTAACAAAGAAATACCCTGCTGTTACAGTCATAGTTTTTTTCCAAGTATTTTTTAGCACAATTCAGTCTGGACTATTTGCTTTAATTGTGGTGAAAGATCAAACTTCATGGAAACTTAAGCTTGATATGGGGTTGATTGTCATTTTTTACCAGGCAATATGTGCACTAGGAATTCGGTACTTCTTACTAACATGGTGCGTACAAAGAGCTGGTCCTTTCTTTTGTGCAATGTTTAAACCAATAGGAATCGTCTTCACTGTTTTCTTGGGTTTTATTTTTCTTGGAGATGAATTTTATCTTGGAAGTTTGATTGGTGCGATTATAATAGTGGTAGGATTTTATGCTGTGCAATGGGGCAAAGCTTCAGAAGAGACAGTTGAGAGAGGGATTGAAAACTTGAAGATGCCGTGTAACATTGTTCCATTGTTACAAAACAAAGAATAA 1032 0.375 MGRLLPFLGMMIAVLLQSGSFVVIKLATKDGINKYVMVVYSMALSTILLLPFAFFNNRSQCPPLTFSILCSFFFLALLGTSTQILSYGGIELSSPTLVSAMLNLIPAFTFVLAVVFRMEKVHWRHYSSQAKVIGTIASMGGAFVVILYKGPPIFNIHSSSSYNTLQFSPNLNWILGGLLSVGDSLVSSIWYIYQVSVTKKYPAVTVIVFFQVFFSTIQSGLFALIVVKDQTSWKLKLDMGLIVIFYQAICALGIRYFLLTWCVQRAGPFFCAMFKPIGIVFTVFLGFIFLGDEFYLGSLIGAIIIVVGFYAVQWGKASEETVERGIENLKMPCNIVPLLQNKE 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01414 343 Pfam EamA-like transporter family 8 146 IPR000620 GO:0016020
Vivi2g01414 343 Pfam EamA-like transporter family 177 311 IPR000620 GO:0016020
Vivi2g01414 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 317 - -
Vivi2g01414 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 148 - -
Vivi2g01414 343 PANTHER WAT1-RELATED PROTEIN 6 320 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01414 Vivi-Chr2 60813508 60826940 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01414 4 341 Nodulin-like Gene Family AT5G40240 39.368 4.24e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01414 - - tpra:123906754 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01414 2 60813508 60826940 Vivi2g01414 2 60813508 60826940 ECH